RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ANKRD26Q9UPS8 1709 aa13.27□□□□□ -0.29
TRUB1-201ENST00000298746 PNMA6AP0CW24 399 aaPredicted RBP13.26□□□□□ -0.29
TRUB1-201ENST00000298746 NEXNQ0ZGT2 675 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 SKIDA1Q1XH10 827 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 GOLPH3LQ9H4A5 285 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 MLH3Q9UHC1 1453 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 MYL6BP14649 208 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 LMAN1P49257 510 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
TRUB1-201ENST00000298746 KRBA2Q6ZNG9 492 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 LRRN4CLQ8ND94 238 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 BICC1Q9H694 974 aaKnown RBP13.26□□□□□ -0.29
TRUB1-201ENST00000298746 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
TRUB1-201ENST00000298746 DDX58O95786 925 aaKnown RBP13.26□□□□□ -0.29
TRUB1-201ENST00000298746 SARM1Q6SZW1 724 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 STK11IPQ8N1F8 1099 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 EPC1Q9H2F5 836 aa13.26□□□□□ -0.29
TRUB1-201ENST00000298746 ZCCHC17Q9NP64 241 aaKnown RBP13.26□□□□□ -0.29
TRUB1-201ENST00000298746 EVCP57679 992 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 GNG11P61952 73 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 DPCR1Q3MIW9 517 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 C10orf67Q8IYJ2 551 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 PIK3C2BO00750 1634 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 CCP110O43303 1012 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 SCRN1Q12765 414 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 C1orf141Q5JVX7 400 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 ARHGEF10O15013 1369 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 UBASH3AP57075 661 aa13.25□□□□□ -0.29
TRUB1-201ENST00000298746 E4F1Q66K89 784 aaPredicted RBP13.24□□□□□ -0.29
TRUB1-201ENST00000298746 DHX40Q8IX18 779 aaKnown RBP13.24□□□□□ -0.29
TRUB1-201ENST00000298746 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
TRUB1-201ENST00000298746 HECW2Q9P2P5 1572 aa13.24□□□□□ -0.29
TRUB1-201ENST00000298746 GRM8O00222 908 aa13.24□□□□□ -0.29
TRUB1-201ENST00000298746 TOP1P11387 765 aaKnown RBP13.24□□□□□ -0.29
TRUB1-201ENST00000298746 ETF1P62495 437 aaKnown RBP13.24□□□□□ -0.29
TRUB1-201ENST00000298746 TTLL5Q6EMB2 1281 aa13.24□□□□□ -0.29
TRUB1-201ENST00000298746 AK7Q96M32 723 aa13.24□□□□□ -0.29
TRUB1-201ENST00000298746 ZNF446Q9NWS9 450 aa13.24□□□□□ -0.29
TRUB1-201ENST00000298746 TAF5LO75529 589 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 CHGBP05060 677 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 MARCKSP29966 332 aaPredicted RBP13.23□□□□□ -0.29
TRUB1-201ENST00000298746 CCDC191Q8NCU4 936 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 SUCLG2Q96I99 432 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 RBM43Q6ZSC3 357 aaKnown RBP13.23□□□□□ -0.29
TRUB1-201ENST00000298746 CWC15Q9P013 229 aaKnown RBP13.23□□□□□ -0.29
TRUB1-201ENST00000298746 SASH1O94885 1247 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 OAS2P29728 719 aaKnown RBP13.23□□□□□ -0.29
TRUB1-201ENST00000298746 CASQ1P31415 396 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 OLFM4Q6UX06 510 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 TXLNBQ8N3L3 684 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 C8orf76Q96K31 380 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 ARFGAP3Q9NP61 516 aa13.23□□□□□ -0.29
TRUB1-201ENST00000298746 NDUFA8P51970 172 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 GYS2P54840 703 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 EIF4A1P60842 406 aaKnown RBP13.22□□□□□ -0.29
TRUB1-201ENST00000298746 CREBRFQ8IUR6 639 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 RCOR1Q9UKL0 485 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 PCDHA7Q9UN72 937 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 FANCCQ00597 558 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 MCM6Q14566 821 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 IMPACTQ9P2X3 320 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 CYP21A2P08686 494 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 PROSER3Q2NL68 480 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 KSR2Q6VAB6 950 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 CERS3Q8IU89 383 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 KIAA1468Q9P260 1216 aa13.22□□□□□ -0.29
TRUB1-201ENST00000298746 FRMPD1Q5SYB0 1578 aa13.21□□□□□ -0.29
TRUB1-201ENST00000298746 ZSCAN12O43309 604 aa13.21□□□□□ -0.29
TRUB1-201ENST00000298746 HAND2P61296 217 aa13.21□□□□□ -0.29
TRUB1-201ENST00000298746 ARMCX5Q6P1M9 558 aa13.21□□□□□ -0.29
TRUB1-201ENST00000298746 TSPYL1Q9H0U9 437 aa13.21□□□□□ -0.29
TRUB1-201ENST00000298746 GOLIM4O00461 696 aa13.21□□□□□ -0.3
TRUB1-201ENST00000298746 ATP1A3P13637 1013 aa13.21□□□□□ -0.3
TRUB1-201ENST00000298746 CYP2C19P33261 490 aa13.21□□□□□ -0.3
TRUB1-201ENST00000298746 LEKR1Q6ZMV7 388 aa13.21□□□□□ -0.3
TRUB1-201ENST00000298746 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.3
TRUB1-201ENST00000298746 SBNO1A3KN83 1393 aa13.21□□□□□ -0.3
TRUB1-201ENST00000298746 HOXC9P31274 260 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
TRUB1-201ENST00000298746 WASHC4Q2M389 1173 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 MCMDC2Q4G0Z9 681 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
TRUB1-201ENST00000298746 SPTLC2O15270 562 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 TPM1P09493 284 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 KARSQ15046 597 aaKnown RBP13.2□□□□□ -0.3
TRUB1-201ENST00000298746 FHOD1Q9Y613 1164 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 CBFA2T2O43439 604 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 ALDH1L1O75891 902 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 ST5P78524 1137 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 ZSCAN26Q16670 478 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 NSUN7Q8NE18 718 aaKnown RBP13.2□□□□□ -0.3
TRUB1-201ENST00000298746 MYD88Q99836 296 aa13.2□□□□□ -0.3
TRUB1-201ENST00000298746 ORC3Q9UBD5 711 aaPredicted RBP13.2□□□□□ -0.3
TRUB1-201ENST00000298746 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.2□□□□□ -0.3
TRUB1-201ENST00000298746 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms