RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 C16orf71Q8IYS4 520 aaPredicted RBP18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 NCOA7Q8NI08 942 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 GOLIM4O00461 696 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 NBPF14Q5TI25 921 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 SIRT1Q96EB6 747 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 USP26Q9BXU7 913 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 OPA1O60313 960 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 CYLC1P35663 651 aaPredicted RBP18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 USHBP1Q8N6Y0 703 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 SEC63Q9UGP8 760 aaKnown RBP18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 FAM83GA6ND36 823 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 SSR1P43307 286 aaKnown RBP18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 NLRP5P59047 1200 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 BICDL1Q6ZP65 573 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 TMOD2Q9NZR1 351 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 MYO5CQ9NQX4 1742 aa18.85■□□□□ 0.61
SNAPC4-201ENST00000298532 CTAGE9A4FU28 777 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 ZNF287Q9HBT7 754 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 ARHGEF10O15013 1369 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 POTEJP0CG39 1038 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 RNF123Q5XPI4 1314 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 MLH3Q9UHC1 1453 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 TMCO5BA8MYB1 307 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 AMPD3Q01432 767 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 TMEM266Q2M3C6 531 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 SYT10Q6XYQ8 523 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 EBAG9O00559 213 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 AKR1B10O60218 316 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 IL2RBP14784 551 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 PLEKHM2Q8IWE5 1019 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
SNAPC4-201ENST00000298532 USP5P45974 858 aa18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 ATP8B2P98198 1209 aa18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 GABPB1Q06547 395 aaPredicted RBP18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 TTC31Q49AM3 519 aaPredicted RBP18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 TMEM67Q5HYA8 995 aa18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 MICU3Q86XE3 530 aa18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 TCEANC2Q96MN5 208 aa18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 RASSF4Q9H2L5 321 aa18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 LMOD1P29536 600 aaPredicted RBP18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 MICALL1Q8N3F8 863 aa18.83■□□□□ 0.61
SNAPC4-201ENST00000298532 ZNF76P36508 570 aa18.83■□□□□ 0.6
SNAPC4-201ENST00000298532 AK2P54819 239 aa18.83■□□□□ 0.6
SNAPC4-201ENST00000298532 RMND1Q9NWS8 449 aa18.83■□□□□ 0.6
SNAPC4-201ENST00000298532 PI4KAP2A4QPH2 592 aa18.83■□□□□ 0.6
SNAPC4-201ENST00000298532 NBPF11Q86T75 865 aa18.83■□□□□ 0.6
SNAPC4-201ENST00000298532 PI4KAP1Q8N8J0 262 aa18.83■□□□□ 0.6
SNAPC4-201ENST00000298532 PPFIA3O75145 1194 aa18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 IFIT5Q13325 482 aaKnown RBP18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 CATIPQ7Z7H3 387 aa18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 MAP3K2Q9Y2U5 619 aa18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 TCP11L1Q9NUJ3 509 aa18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 VPS18Q9P253 973 aa18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 TRIM21P19474 475 aaKnown RBP18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 KLF18A0A0U1RQI7 1052 aa18.82■□□□□ 0.6
SNAPC4-201ENST00000298532 UBA7P41226 1012 aa18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 PIK3C2GO75747 1445 aa18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 FLT4P35916 1363 aa18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 IRX3P78415 501 aaPredicted RBP18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 NPATQ14207 1427 aa18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 RIOK3O14730 519 aaKnown RBP18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 BMP15O95972 392 aa18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 HAND2P61296 217 aa18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 SLC26A6Q9BXS9 759 aa18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 SNRPA1P09661 255 aaKnown RBP18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 RPGRQ92834 1020 aaKnown RBP18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 TRIM47Q96LD4 638 aa18.81■□□□□ 0.6
SNAPC4-201ENST00000298532 CCDC40Q4G0X9 1142 aa18.8■□□□□ 0.6
SNAPC4-201ENST00000298532 ABCC1P33527 1531 aa18.8■□□□□ 0.6
SNAPC4-201ENST00000298532 NOP2P46087 812 aaKnown RBP18.8■□□□□ 0.6
SNAPC4-201ENST00000298532 ATRIPQ8WXE1 791 aa18.8■□□□□ 0.6
SNAPC4-201ENST00000298532 RFC4P35249 363 aa18.8■□□□□ 0.6
SNAPC4-201ENST00000298532 IFI16Q16666 785 aaKnown RBP18.8■□□□□ 0.6
SNAPC4-201ENST00000298532 C10orf67Q8IYJ2 551 aa18.8■□□□□ 0.6
SNAPC4-201ENST00000298532 IFNKQ9P0W0 207 aa18.8■□□□□ 0.6
SNAPC4-201ENST00000298532 SPTLC2O15270 562 aa18.8■□□□□ 0.6
SNAPC4-201ENST00000298532 WWC2Q6AWC2 1192 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 Q6ZUG5 572 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 CNKSR2Q8WXI2 1034 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 GTF3C6Q969F1 213 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 TTF1Q15361 905 aaPredicted RBP18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 HSP90AA4PQ58FG1 418 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 CEP85Q6P2H3 762 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 CCDC144CPQ8IYA2 1237 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 CALML4Q96GE6 196 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 MKNK2Q9HBH9 465 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 SLAIN2Q9P270 581 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 ALG1Q9BT22 464 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 GCP02774 474 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 DESP17661 470 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 RRAGBQ5VZM2 374 aa18.79■□□□□ 0.6
SNAPC4-201ENST00000298532 WDHD1O75717 1129 aaPredicted RBP18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 U2AF2P26368 475 aaKnown RBP eCLIP18.78■□□□□ 0.64e-7■■■■■ 30.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms