RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 CELF1Q92879 486 aaKnown RBP23.4■■□□□ 1.34
LRPAP1-201ENST00000296325 HDAC9Q9UKV0 1011 aa23.4■■□□□ 1.34
LRPAP1-201ENST00000296325 RIMBP2O15034 1052 aa23.39■■□□□ 1.33
LRPAP1-201ENST00000296325 TBC1D8O95759 1140 aa23.39■■□□□ 1.33
LRPAP1-201ENST00000296325 PLEKHF1Q96S99 279 aa23.39■■□□□ 1.33
LRPAP1-201ENST00000296325 GPSM2P81274 684 aa23.38■■□□□ 1.33
LRPAP1-201ENST00000296325 DOK7Q18PE1 504 aa23.38■■□□□ 1.33
LRPAP1-201ENST00000296325 BRCA2P51587 3418 aa23.38■■□□□ 1.33
LRPAP1-201ENST00000296325 C6orf229H3BNL8 230 aa23.37■■□□□ 1.33
LRPAP1-201ENST00000296325 SF3B3Q15393 1217 aaKnown RBP23.37■■□□□ 1.33
LRPAP1-201ENST00000296325 ANGEL2Q5VTE6 544 aaKnown RBP23.37■■□□□ 1.33
LRPAP1-201ENST00000296325 COPS6Q7L5N1 327 aa23.37■■□□□ 1.33
LRPAP1-201ENST00000296325 GPR25O00155 361 aa23.36■■□□□ 1.33
LRPAP1-201ENST00000296325 TM4SF4P48230 202 aa23.36■■□□□ 1.33
LRPAP1-201ENST00000296325 NFE2L2Q16236 605 aa23.36■■□□□ 1.33
LRPAP1-201ENST00000296325 TBC1D16Q8TBP0 767 aa23.36■■□□□ 1.33
LRPAP1-201ENST00000296325 EYA3Q99504 573 aa23.36■■□□□ 1.33
LRPAP1-201ENST00000296325 CFHR5Q9BXR6 569 aa23.36■■□□□ 1.33
LRPAP1-201ENST00000296325 PITPNM2Q9BZ72 1349 aa23.35■■□□□ 1.33
LRPAP1-201ENST00000296325 EIF2S2P20042 333 aaKnown RBP23.35■■□□□ 1.33
LRPAP1-201ENST00000296325 SCARF1Q14162 830 aa23.35■■□□□ 1.33
LRPAP1-201ENST00000296325 XAGE3Q8WTP9 111 aa23.35■■□□□ 1.33
LRPAP1-201ENST00000296325 MOB2Q70IA6 237 aa23.34■■□□□ 1.33
LRPAP1-201ENST00000296325 AGBL3Q8NEM8 1001 aa23.33■■□□□ 1.33
LRPAP1-201ENST00000296325 GMLQ99445 158 aa23.33■■□□□ 1.33
LRPAP1-201ENST00000296325 PODXL2Q9NZ53 605 aa23.33■■□□□ 1.33
LRPAP1-201ENST00000296325 KIAA0100Q14667 2235 aaKnown RBP23.32■■□□□ 1.32
LRPAP1-201ENST00000296325 NECTIN2Q92692 538 aa23.32■■□□□ 1.32
LRPAP1-201ENST00000296325 TSPYL4Q9UJ04 414 aa23.32■■□□□ 1.32
LRPAP1-201ENST00000296325 AIMP1Q12904 312 aaKnown RBP23.31■■□□□ 1.32
LRPAP1-201ENST00000296325 RSBN1LQ6PCB5 846 aaPredicted RBP23.31■■□□□ 1.32
LRPAP1-201ENST00000296325 PSME4Q14997 1843 aa23.31■■□□□ 1.32
LRPAP1-201ENST00000296325 UBE2Q2LH0YL09 131 aa23.3■■□□□ 1.32
LRPAP1-201ENST00000296325 NEFMP07197 916 aa23.3■■□□□ 1.32
LRPAP1-201ENST00000296325 ZC3H12CQ9C0D7 883 aaKnown RBP23.3■■□□□ 1.32
LRPAP1-201ENST00000296325 R3HDMLQ9H3Y0 253 aa23.3■■□□□ 1.32
LRPAP1-201ENST00000296325 FKTNO75072 461 aa23.29■■□□□ 1.32
LRPAP1-201ENST00000296325 FAM89AQ96GI7 184 aa23.29■■□□□ 1.32
LRPAP1-201ENST00000296325 ISCA1Q9BUE6 129 aa23.29■■□□□ 1.32
LRPAP1-201ENST00000296325 FXR1P51114 621 aaKnown RBP eCLIP23.28■■□□□ 1.32
LRPAP1-201ENST00000296325 RPS8P62241 208 aaKnown RBP23.28■■□□□ 1.32
LRPAP1-201ENST00000296325 ZNF428Q96B54 188 aa23.28■■□□□ 1.32
LRPAP1-201ENST00000296325 MYOZ2Q9NPC6 264 aa23.28■■□□□ 1.32
LRPAP1-201ENST00000296325 BABAM1Q9NWV8 329 aa23.28■■□□□ 1.32
LRPAP1-201ENST00000296325 POTEFA5A3E0 1075 aa23.26■■□□□ 1.31
LRPAP1-201ENST00000296325 USP17L8P0C7I0 530 aa23.26■■□□□ 1.31
LRPAP1-201ENST00000296325 SCAF8Q9UPN6 1271 aaKnown RBP23.26■■□□□ 1.31
LRPAP1-201ENST00000296325 CEP290O15078 2479 aa23.26■■□□□ 1.31
LRPAP1-201ENST00000296325 SZT2Q5T011 3432 aa23.26■■□□□ 1.31
LRPAP1-201ENST00000296325 UFL1O94874 794 aa23.25■■□□□ 1.31
LRPAP1-201ENST00000296325 SREBF2Q12772 1141 aa23.25■■□□□ 1.31
LRPAP1-201ENST00000296325 PRAMEF18Q5VWM3 479 aa23.25■■□□□ 1.31
LRPAP1-201ENST00000296325 RBBP6Q7Z6E9 1792 aaKnown RBP23.24■■□□□ 1.31
LRPAP1-201ENST00000296325 PLBD2Q8NHP8 589 aa23.24■■□□□ 1.31
LRPAP1-201ENST00000296325 INTS3Q68E01 1043 aaKnown RBP23.23■■□□□ 1.31
LRPAP1-201ENST00000296325 TRIOBPQ9H2D6 2365 aa23.22■■□□□ 1.31
LRPAP1-201ENST00000296325 NBPF9Q3BBW0 867 aa23.22■■□□□ 1.31
LRPAP1-201ENST00000296325 GGA1Q9UJY5 639 aa23.22■■□□□ 1.31
LRPAP1-201ENST00000296325 IRS4O14654 1257 aaPredicted RBP23.21■■□□□ 1.31
LRPAP1-201ENST00000296325 MKRN3Q13064 507 aaKnown RBP23.21■■□□□ 1.31
LRPAP1-201ENST00000296325 TRIM28Q13263 835 aaKnown RBP23.21■■□□□ 1.31
LRPAP1-201ENST00000296325 ATP5J2-PTCD1G3V325 749 aa23.2■■□□□ 1.3
LRPAP1-201ENST00000296325 PTPN12Q05209 780 aaKnown RBP23.2■■□□□ 1.3
LRPAP1-201ENST00000296325 ANKRD13DQ6ZTN6 518 aa23.2■■□□□ 1.3
LRPAP1-201ENST00000296325 OTOP1Q7RTM1 612 aa23.2■■□□□ 1.3
LRPAP1-201ENST00000296325 SEC31BQ9NQW1 1179 aa23.2■■□□□ 1.3
LRPAP1-201ENST00000296325 CHPF2Q9P2E5 772 aa23.2■■□□□ 1.3
LRPAP1-201ENST00000296325 ANKIB1Q9P2G1 1089 aa23.2■■□□□ 1.3
LRPAP1-201ENST00000296325 RANBP2P49792 3224 aaKnown RBP23.2■■□□□ 1.3
LRPAP1-201ENST00000296325 MAPK8IP3Q9UPT6 1336 aa23.19■■□□□ 1.3
LRPAP1-201ENST00000296325 USP17L3A6NCW0 530 aa23.19■■□□□ 1.3
LRPAP1-201ENST00000296325 USP17L4A6NCW7 530 aa23.19■■□□□ 1.3
LRPAP1-201ENST00000296325 G3V3G9 751 aa23.19■■□□□ 1.3
LRPAP1-201ENST00000296325 LDLRAD1Q5T700 205 aa23.19■■□□□ 1.3
LRPAP1-201ENST00000296325 DCAF8Q5TAQ9 597 aa23.19■■□□□ 1.3
LRPAP1-201ENST00000296325 USP17L1Q7RTZ2 530 aa23.19■■□□□ 1.3
LRPAP1-201ENST00000296325 PODNQ7Z5L7 613 aa23.19■■□□□ 1.3
LRPAP1-201ENST00000296325 ZNF646O15015 1829 aaPredicted RBP23.19■■□□□ 1.3
LRPAP1-201ENST00000296325 WNT10BO00744 389 aa23.18■■□□□ 1.3
LRPAP1-201ENST00000296325 ALDH1A1P00352 501 aa23.18■■□□□ 1.3
LRPAP1-201ENST00000296325 TTLL12Q14166 644 aaPredicted RBP23.18■■□□□ 1.3
LRPAP1-201ENST00000296325 KRT24Q2M2I5 525 aa23.18■■□□□ 1.3
LRPAP1-201ENST00000296325 RTL5Q5HYW3 569 aaPredicted RBP23.18■■□□□ 1.3
LRPAP1-201ENST00000296325 SPRYD7Q5W111 196 aa23.18■■□□□ 1.3
LRPAP1-201ENST00000296325 TRIM17Q9Y577 477 aa23.18■■□□□ 1.3
LRPAP1-201ENST00000296325 NF2P35240 595 aa23.16■■□□□ 1.3
LRPAP1-201ENST00000296325 CCER1Q8TC90 406 aaPredicted RBP23.16■■□□□ 1.3
LRPAP1-201ENST00000296325 ARMC5Q96C12 935 aa23.16■■□□□ 1.3
LRPAP1-201ENST00000296325 PNNQ9H307 717 aaKnown RBP23.16■■□□□ 1.3
LRPAP1-201ENST00000296325 XDHP47989 1333 aa23.15■■□□□ 1.3
LRPAP1-201ENST00000296325 LAMB1P07942 1786 aa23.15■■□□□ 1.3
LRPAP1-201ENST00000296325 RIPK4P57078 832 aa23.15■■□□□ 1.3
LRPAP1-201ENST00000296325 DACT2Q5SW24 774 aa23.15■■□□□ 1.3
LRPAP1-201ENST00000296325 IFNL1Q8IU54 200 aa23.14■■□□□ 1.29
LRPAP1-201ENST00000296325 ZBTB38Q8NAP3 1195 aaPredicted RBP23.14■■□□□ 1.29
LRPAP1-201ENST00000296325 A0A0C4DFX4 3053 aa23.13■■□□□ 1.29
LRPAP1-201ENST00000296325 CHL1O00533 1208 aa23.13■■□□□ 1.29
LRPAP1-201ENST00000296325 INHBEP58166 350 aa23.13■■□□□ 1.29
LRPAP1-201ENST00000296325 ARMC9Q7Z3E5 817 aa23.13■■□□□ 1.29
LRPAP1-201ENST00000296325 PTPN22Q9Y2R2 807 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms