RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 PER1O15534 1290 aaPredicted RBP20.67■□□□□ 0.9
UBXN1-201ENST00000294119 ECE2O60344 883 aa20.67■□□□□ 0.9
UBXN1-201ENST00000294119 UBE2Q2LH0YL09 131 aa20.66■□□□□ 0.9
UBXN1-201ENST00000294119 SREBF2Q12772 1141 aa20.66■□□□□ 0.9
UBXN1-201ENST00000294119 SCARF1Q14162 830 aa20.66■□□□□ 0.9
UBXN1-201ENST00000294119 DDX46Q7L014 1031 aaKnown RBP20.66■□□□□ 0.9
UBXN1-201ENST00000294119 SLC17A8Q8NDX2 589 aa20.66■□□□□ 0.9
UBXN1-201ENST00000294119 POLLQ9UGP5 575 aa20.66■□□□□ 0.9
UBXN1-201ENST00000294119 RRP7AQ9Y3A4 280 aaKnown RBP20.66■□□□□ 0.9
UBXN1-201ENST00000294119 TRIM17Q9Y577 477 aa20.66■□□□□ 0.9
UBXN1-201ENST00000294119 LAMB1P07942 1786 aa20.66■□□□□ 0.9
UBXN1-201ENST00000294119 PSME4Q14997 1843 aa20.65■□□□□ 0.9
UBXN1-201ENST00000294119 HTATSF1O43719 755 aaKnown RBP20.65■□□□□ 0.9
UBXN1-201ENST00000294119 DCTN1Q14203 1278 aa20.65■□□□□ 0.9
UBXN1-201ENST00000294119 TAF7Q15545 349 aaPredicted RBP20.65■□□□□ 0.9
UBXN1-201ENST00000294119 MYL6BP14649 208 aa20.64■□□□□ 0.89
UBXN1-201ENST00000294119 DIEXFQ68CQ4 756 aaKnown RBP20.64■□□□□ 0.89
UBXN1-201ENST00000294119 RTF1Q92541 710 aaKnown RBP20.64■□□□□ 0.89
UBXN1-201ENST00000294119 NECTIN2Q92692 538 aa20.64■□□□□ 0.89
UBXN1-201ENST00000294119 PTPN22Q9Y2R2 807 aa20.64■□□□□ 0.89
UBXN1-201ENST00000294119 COL4A1P02462 1669 aa20.64■□□□□ 0.89
UBXN1-201ENST00000294119 ERBB4Q15303 1308 aa20.63■□□□□ 0.89
UBXN1-201ENST00000294119 HCLS1P14317 486 aaPredicted RBP20.63■□□□□ 0.89
UBXN1-201ENST00000294119 MIS18AQ9NYP9 233 aa20.63■□□□□ 0.89
UBXN1-201ENST00000294119 GMLQ99445 158 aa20.62■□□□□ 0.89
UBXN1-201ENST00000294119 UNC80Q8N2C7 3258 aa20.61■□□□□ 0.89
UBXN1-201ENST00000294119 H0YGN5 161 aa20.61■□□□□ 0.89
UBXN1-201ENST00000294119 RIMBP2O15034 1052 aa20.61■□□□□ 0.89
UBXN1-201ENST00000294119 ALDH1A1P00352 501 aa20.61■□□□□ 0.89
UBXN1-201ENST00000294119 EIF4A1P60842 406 aaKnown RBP20.61■□□□□ 0.89
UBXN1-201ENST00000294119 DOK7Q18PE1 504 aa20.61■□□□□ 0.89
UBXN1-201ENST00000294119 AGBL3Q8NEM8 1001 aa20.61■□□□□ 0.89
UBXN1-201ENST00000294119 NSFL1CQ9UNZ2 370 aaKnown RBP20.61■□□□□ 0.89
UBXN1-201ENST00000294119 NLRP10Q86W26 655 aa20.6■□□□□ 0.89
UBXN1-201ENST00000294119 GPSM2P81274 684 aa20.59■□□□□ 0.89
UBXN1-201ENST00000294119 PDIA6Q15084 440 aa20.59■□□□□ 0.89
UBXN1-201ENST00000294119 MKRN3Q13064 507 aaKnown RBP20.58■□□□□ 0.89
UBXN1-201ENST00000294119 CC2D1BQ5T0F9 858 aaKnown RBP20.58■□□□□ 0.89
UBXN1-201ENST00000294119 RSBN1LQ6PCB5 846 aaPredicted RBP20.58■□□□□ 0.89
UBXN1-201ENST00000294119 TBC1D16Q8TBP0 767 aa20.58■□□□□ 0.89
UBXN1-201ENST00000294119 CELF1Q92879 486 aaKnown RBP20.58■□□□□ 0.89
UBXN1-201ENST00000294119 ZNF333Q96JL9 665 aa20.58■□□□□ 0.89
UBXN1-201ENST00000294119 EYA3Q99504 573 aa20.58■□□□□ 0.89
UBXN1-201ENST00000294119 PRO3102Q9H379 93 aa20.58■□□□□ 0.89
UBXN1-201ENST00000294119 MYOZ2Q9NPC6 264 aa20.58■□□□□ 0.89
UBXN1-201ENST00000294119 C6orf229H3BNL8 230 aa20.57■□□□□ 0.88
UBXN1-201ENST00000294119 CAP1Q01518 475 aa20.57■□□□□ 0.88
UBXN1-201ENST00000294119 PTPN12Q05209 780 aaKnown RBP20.57■□□□□ 0.88
UBXN1-201ENST00000294119 LDLRAD1Q5T700 205 aa20.57■□□□□ 0.88
UBXN1-201ENST00000294119 PRAMEF18Q5VWM3 479 aa20.57■□□□□ 0.88
UBXN1-201ENST00000294119 SPRYD7Q5W111 196 aa20.57■□□□□ 0.88
UBXN1-201ENST00000294119 SCAF8Q9UPN6 1271 aaKnown RBP20.57■□□□□ 0.88
UBXN1-201ENST00000294119 SH3TC1Q8TE82 1336 aa20.56■□□□□ 0.88
UBXN1-201ENST00000294119 IFNL1Q8IU54 200 aa20.56■□□□□ 0.88
UBXN1-201ENST00000294119 RBM27Q9P2N5 1060 aaKnown RBP20.56■□□□□ 0.88
UBXN1-201ENST00000294119 SF3B3Q15393 1217 aaKnown RBP20.55■□□□□ 0.88
UBXN1-201ENST00000294119 CHRDL2Q6WN34 429 aa20.55■□□□□ 0.88
UBXN1-201ENST00000294119 PNISRQ8TF01 805 aaKnown RBP20.55■□□□□ 0.88
UBXN1-201ENST00000294119 ERO1AQ96HE7 468 aa20.55■□□□□ 0.88
UBXN1-201ENST00000294119 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
UBXN1-201ENST00000294119 USP17L8P0C7I0 530 aa20.54■□□□□ 0.88
UBXN1-201ENST00000294119 MNX1P50219 401 aaPredicted RBP20.54■□□□□ 0.88
UBXN1-201ENST00000294119 INHBEP58166 350 aa20.54■□□□□ 0.88
UBXN1-201ENST00000294119 ZNF646O15015 1829 aaPredicted RBP20.53■□□□□ 0.88
UBXN1-201ENST00000294119 MANSC4A6NHS7 340 aaPredicted RBP20.53■□□□□ 0.88
UBXN1-201ENST00000294119 IGF2BP3O00425 579 aaKnown RBP eCLIP20.53■□□□□ 0.88
UBXN1-201ENST00000294119 HSP90AB3PQ58FF7 597 aa20.53■□□□□ 0.88
UBXN1-201ENST00000294119 CD99L2Q8TCZ2 262 aa20.53■□□□□ 0.88
UBXN1-201ENST00000294119 THUMPD2Q9BTF0 503 aaKnown RBP20.53■□□□□ 0.88
UBXN1-201ENST00000294119 TRMT112Q9UI30 125 aaKnown RBP20.53■□□□□ 0.88
UBXN1-201ENST00000294119 TCIRG1Q13488 830 aa20.52■□□□□ 0.88
UBXN1-201ENST00000294119 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.88
UBXN1-201ENST00000294119 TMEM106CQ9BVX2 250 aa20.52■□□□□ 0.88
UBXN1-201ENST00000294119 ZC3H12CQ9C0D7 883 aaKnown RBP20.52■□□□□ 0.88
UBXN1-201ENST00000294119 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
UBXN1-201ENST00000294119 ANP32CO43423 234 aa20.51■□□□□ 0.87
UBXN1-201ENST00000294119 TTLL12Q14166 644 aaPredicted RBP20.51■□□□□ 0.87
UBXN1-201ENST00000294119 PROSER3Q2NL68 480 aa20.51■□□□□ 0.87
UBXN1-201ENST00000294119 EFCC1Q9HA90 598 aa20.51■□□□□ 0.87
UBXN1-201ENST00000294119 ZBTB48P10074 688 aaPredicted RBP20.49■□□□□ 0.87
UBXN1-201ENST00000294119 NF2P35240 595 aa20.49■□□□□ 0.87
UBXN1-201ENST00000294119 ARMC9Q7Z3E5 817 aa20.49■□□□□ 0.87
UBXN1-201ENST00000294119 VCANP13611 3396 aa20.49■□□□□ 0.87
UBXN1-201ENST00000294119 WNT10BO00744 389 aa20.48■□□□□ 0.87
UBXN1-201ENST00000294119 MAP3K11Q16584 847 aa20.48■□□□□ 0.87
UBXN1-201ENST00000294119 CRHR2Q13324 411 aa20.47■□□□□ 0.87
UBXN1-201ENST00000294119 SP3Q02447 781 aa20.46■□□□□ 0.87
UBXN1-201ENST00000294119 RALBP1Q15311 655 aa20.46■□□□□ 0.87
UBXN1-201ENST00000294119 ANXA1P04083 346 aa20.45■□□□□ 0.86
UBXN1-201ENST00000294119 RPS8P62241 208 aaKnown RBP20.45■□□□□ 0.86
UBXN1-201ENST00000294119 WNK4Q96J92 1243 aa20.45■□□□□ 0.86
UBXN1-201ENST00000294119 USP17L3A6NCW0 530 aa20.44■□□□□ 0.86
UBXN1-201ENST00000294119 USP17L4A6NCW7 530 aa20.44■□□□□ 0.86
UBXN1-201ENST00000294119 UFL1O94874 794 aa20.44■□□□□ 0.86
UBXN1-201ENST00000294119 U2AF1L5P0DN76 240 aaPredicted RBP20.44■□□□□ 0.86
UBXN1-201ENST00000294119 U2AF1Q01081 240 aaKnown RBP eCLIP20.44■□□□□ 0.86
UBXN1-201ENST00000294119 COPS6Q7L5N1 327 aa20.44■□□□□ 0.86
UBXN1-201ENST00000294119 USP17L1Q7RTZ2 530 aa20.44■□□□□ 0.86
UBXN1-201ENST00000294119 PODNQ7Z5L7 613 aa20.44■□□□□ 0.86
UBXN1-201ENST00000294119 NUDCQ9Y266 331 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms