RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 COL9A3Q14050 684 aaPredicted RBP18.64■□□□□ 0.57
SMAD6-201ENST00000288840 KLF18A0A0U1RQI7 1052 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 PHKG2P15735 406 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 MARCKSP29966 332 aaPredicted RBP18.63■□□□□ 0.57
SMAD6-201ENST00000288840 HMGN5P82970 282 aaKnown RBP18.63■□□□□ 0.57
SMAD6-201ENST00000288840 NECTIN1Q15223 517 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 LEO1Q8WVC0 666 aaPredicted RBP18.63■□□□□ 0.57
SMAD6-201ENST00000288840 PUS3Q9BZE2 481 aaKnown RBP18.63■□□□□ 0.57
SMAD6-201ENST00000288840 PDCL3Q9H2J4 239 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 ORC3Q9UBD5 711 aaPredicted RBP18.63■□□□□ 0.57
SMAD6-201ENST00000288840 UVSSAQ2YD98 709 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 ZCRB1Q8TBF4 217 aaKnown RBP18.63■□□□□ 0.57
SMAD6-201ENST00000288840 TTC14Q96N46 770 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 DLC1Q96QB1 1528 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 LRMPQ12912 555 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 HS1BP3Q53T59 392 aa18.63■□□□□ 0.57
SMAD6-201ENST00000288840 TAF5LO75529 589 aa18.62■□□□□ 0.57
SMAD6-201ENST00000288840 PDILTQ8N807 584 aa18.62■□□□□ 0.57
SMAD6-201ENST00000288840 DCAF5Q96JK2 942 aa18.62■□□□□ 0.57
SMAD6-201ENST00000288840 DDX19AQ9NUU7 478 aaKnown RBP18.62■□□□□ 0.57
SMAD6-201ENST00000288840 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMAD6-201ENST00000288840 V9GYY5 206 aaPredicted RBP18.62■□□□□ 0.57
SMAD6-201ENST00000288840 A0A1B0GVL5 298 aa18.62■□□□□ 0.57
SMAD6-201ENST00000288840 TULP1O00294 542 aaPredicted RBP18.62■□□□□ 0.57
SMAD6-201ENST00000288840 ZNF213O14771 459 aa18.62■□□□□ 0.57
SMAD6-201ENST00000288840 CDK11BP21127 795 aaKnown RBP18.62■□□□□ 0.57
SMAD6-201ENST00000288840 MCM5P33992 734 aa18.62■□□□□ 0.57
SMAD6-201ENST00000288840 TRMT112Q9UI30 125 aaKnown RBP18.62■□□□□ 0.57
SMAD6-201ENST00000288840 SSH2Q76I76 1423 aa18.62■□□□□ 0.57
SMAD6-201ENST00000288840 KIF20BQ96Q89 1820 aa18.62■□□□□ 0.57
SMAD6-201ENST00000288840 CYP21A2P08686 494 aa18.61■□□□□ 0.57
SMAD6-201ENST00000288840 ABCF2Q9UG63 623 aa18.61■□□□□ 0.57
SMAD6-201ENST00000288840 SALL3Q9BXA9 1300 aa18.61■□□□□ 0.57
SMAD6-201ENST00000288840 TBC1D2BQ9UPU7 963 aa18.61■□□□□ 0.57
SMAD6-201ENST00000288840 GPHNQ9NQX3 736 aaPredicted RBP18.61■□□□□ 0.57
SMAD6-201ENST00000288840 PES1O00541 588 aaKnown RBP18.6■□□□□ 0.57
SMAD6-201ENST00000288840 DHX32Q7L7V1 743 aaKnown RBP18.6■□□□□ 0.57
SMAD6-201ENST00000288840 CBX8Q9HC52 389 aa18.6■□□□□ 0.57
SMAD6-201ENST00000288840 TNNT1P13805 278 aa18.6■□□□□ 0.57
SMAD6-201ENST00000288840 PI16Q6UXB8 463 aa18.6■□□□□ 0.57
SMAD6-201ENST00000288840 NRBP1Q9UHY1 535 aa18.6■□□□□ 0.57
SMAD6-201ENST00000288840 IGSF3O75054 1194 aa18.6■□□□□ 0.57
SMAD6-201ENST00000288840 VPS37DQ86XT2 251 aa18.6■□□□□ 0.57
SMAD6-201ENST00000288840 CEP57L1Q8IYX8 460 aa18.59■□□□□ 0.57
SMAD6-201ENST00000288840 AKAP17AQ02040 695 aaKnown RBP18.59■□□□□ 0.57
SMAD6-201ENST00000288840 PTPN12Q05209 780 aaKnown RBP18.59■□□□□ 0.57
SMAD6-201ENST00000288840 TM6SF1Q9BZW5 370 aa18.59■□□□□ 0.57
SMAD6-201ENST00000288840 DHX16O60231 1041 aaKnown RBP18.59■□□□□ 0.57
SMAD6-201ENST00000288840 RASSF8Q8NHQ8 419 aa18.59■□□□□ 0.57
SMAD6-201ENST00000288840 NAT10Q9H0A0 1025 aaKnown RBP18.59■□□□□ 0.57
SMAD6-201ENST00000288840 SLC4A8Q2Y0W8 1093 aa18.58■□□□□ 0.57
SMAD6-201ENST00000288840 BICDL1Q6ZP65 573 aa18.58■□□□□ 0.57
SMAD6-201ENST00000288840 MPHOSPH8Q99549 860 aa18.58■□□□□ 0.57
SMAD6-201ENST00000288840 PYCARDQ9ULZ3 195 aa18.58■□□□□ 0.57
SMAD6-201ENST00000288840 ERBB3P21860 1342 aa18.58■□□□□ 0.57
SMAD6-201ENST00000288840 KBTBD3Q8NAB2 608 aa18.58■□□□□ 0.56
SMAD6-201ENST00000288840 CCDC112Q8NEF3 446 aa18.58■□□□□ 0.56
SMAD6-201ENST00000288840 AIDAQ96BJ3 306 aa18.58■□□□□ 0.56
SMAD6-201ENST00000288840 ZBTB9Q96C00 473 aa18.58■□□□□ 0.56
SMAD6-201ENST00000288840 TMX1Q9H3N1 280 aa18.58■□□□□ 0.56
SMAD6-201ENST00000288840 CTNNA3Q9UI47 895 aa18.58■□□□□ 0.56
SMAD6-201ENST00000288840 IL15P40933 162 aaPredicted RBP18.58■□□□□ 0.56
SMAD6-201ENST00000288840 SLC9C2Q5TAH2 1124 aa18.58■□□□□ 0.56
SMAD6-201ENST00000288840 AOPEPQ8N6M6 819 aa18.58■□□□□ 0.56
SMAD6-201ENST00000288840 SERPINC1P01008 464 aa18.57■□□□□ 0.56
SMAD6-201ENST00000288840 ATP5JP18859 108 aa18.57■□□□□ 0.56
SMAD6-201ENST00000288840 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.57■□□□□ 0.56
SMAD6-201ENST00000288840 GJB4Q9NTQ9 266 aa18.57■□□□□ 0.56
SMAD6-201ENST00000288840 MINDY4BA8MYZ0 360 aa18.57■□□□□ 0.56
SMAD6-201ENST00000288840 PLBD2Q8NHP8 589 aa18.57■□□□□ 0.56
SMAD6-201ENST00000288840 PRC1O43663 620 aa18.57■□□□□ 0.56
SMAD6-201ENST00000288840 CYP27B1O15528 508 aa18.56■□□□□ 0.56
SMAD6-201ENST00000288840 ZNF500O60304 480 aaPredicted RBP18.56■□□□□ 0.56
SMAD6-201ENST00000288840 TPM3P06753 285 aa18.56■□□□□ 0.56
SMAD6-201ENST00000288840 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
SMAD6-201ENST00000288840 HMGB1P09429 215 aaKnown RBP18.56■□□□□ 0.56
SMAD6-201ENST00000288840 TDO2P48775 406 aa18.56■□□□□ 0.56
SMAD6-201ENST00000288840 SCRN1Q12765 414 aa18.56■□□□□ 0.56
SMAD6-201ENST00000288840 MYL10Q9BUA6 226 aa18.56■□□□□ 0.56
SMAD6-201ENST00000288840 RPAP1Q9BWH6 1393 aaPredicted RBP18.56■□□□□ 0.56
SMAD6-201ENST00000288840 PDCL2Q8N4E4 241 aa18.56■□□□□ 0.56
SMAD6-201ENST00000288840 RICTORQ6R327 1708 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 NRKQ7Z2Y5 1582 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 EYA2O00167 538 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 RNF113AO15541 343 aaKnown RBP18.55■□□□□ 0.56
SMAD6-201ENST00000288840 ADORA1P30542 326 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 PPP4R3BQ5MIZ7 849 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 PDLIM2Q96JY6 352 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 A0A0G2JLW4 131 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 ERICH2A1L162 156 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 GTF3C6Q969F1 213 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 USP28Q96RU2 1077 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 MAP7D2Q96T17 732 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 DYNC1I1O14576 645 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 STARD3NLO95772 234 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 TOB2Q14106 344 aaPredicted RBP18.55■□□□□ 0.56
SMAD6-201ENST00000288840 ATP2B3Q16720 1220 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 SYNE4Q8N205 404 aa18.55■□□□□ 0.56
SMAD6-201ENST00000288840 ZAP70P43403 619 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms