RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 MROH5Q6ZUA9 1318 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 ADORA1P30542 326 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 ATP2B3Q16720 1220 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 SLC10A5Q5PT55 438 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 TRAPPC3LQ5T215 181 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 FAM227BQ96M60 508 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 ANTXR1Q9H6X2 564 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 SEC31BQ9NQW1 1179 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 PALD1Q9ULE6 856 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 NDUFB9Q9Y6M9 179 aa26.69■■□□□ 1.86
CCDC7-201ENST00000277657 PDE8BO95263 885 aa26.68■■□□□ 1.86
CCDC7-201ENST00000277657 ADRA2BP18089 450 aa26.68■■□□□ 1.86
CCDC7-201ENST00000277657 BICDL1Q6ZP65 573 aa26.68■■□□□ 1.86
CCDC7-201ENST00000277657 SETDB2Q96T68 719 aa26.68■■□□□ 1.86
CCDC7-201ENST00000277657 NYXQ9GZU5 481 aa26.68■■□□□ 1.86
CCDC7-201ENST00000277657 UBR3Q6ZT12 1888 aa26.68■■□□□ 1.86
CCDC7-201ENST00000277657 SF3B3Q15393 1217 aaKnown RBP26.68■■□□□ 1.86
CCDC7-201ENST00000277657 CCDC158Q5M9N0 1113 aa26.68■■□□□ 1.86
CCDC7-201ENST00000277657 IFIT1P09914 478 aaKnown RBP26.67■■□□□ 1.86
CCDC7-201ENST00000277657 KBTBD3Q8NAB2 608 aa26.67■■□□□ 1.86
CCDC7-201ENST00000277657 PAG1Q9NWQ8 432 aa26.67■■□□□ 1.86
CCDC7-201ENST00000277657 CASZ1Q86V15 1759 aa26.67■■□□□ 1.86
CCDC7-201ENST00000277657 MED23Q9ULK4 1368 aa26.67■■□□□ 1.86
CCDC7-201ENST00000277657 A0A0D9SFI3 127 aa26.66■■□□□ 1.86
CCDC7-201ENST00000277657 K7ELQ4 463 aaPredicted RBP26.66■■□□□ 1.86
CCDC7-201ENST00000277657 RFC4P35249 363 aa26.66■■□□□ 1.86
CCDC7-201ENST00000277657 GORABQ5T7V8 394 aa26.65■■□□□ 1.86
CCDC7-201ENST00000277657 DDX46Q7L014 1031 aaKnown RBP26.65■■□□□ 1.86
CCDC7-201ENST00000277657 ARAP2Q8WZ64 1704 aa26.64■■□□□ 1.86
CCDC7-201ENST00000277657 TTC39AQ5SRH9 613 aa26.64■■□□□ 1.86
CCDC7-201ENST00000277657 MPHOSPH8Q99549 860 aa26.64■■□□□ 1.86
CCDC7-201ENST00000277657 SLKQ9H2G2 1235 aaPredicted RBP26.64■■□□□ 1.86
CCDC7-201ENST00000277657 CCDC171Q6TFL3 1326 aa26.64■■□□□ 1.85
CCDC7-201ENST00000277657 GOLIM4O00461 696 aa26.64■■□□□ 1.85
CCDC7-201ENST00000277657 ST18O60284 1047 aa26.64■■□□□ 1.85
CCDC7-201ENST00000277657 PHF14O94880 888 aa26.64■■□□□ 1.85
CCDC7-201ENST00000277657 FGFR2P21802 821 aa26.64■■□□□ 1.85
CCDC7-201ENST00000277657 PTH1RQ03431 593 aa26.64■■□□□ 1.85
CCDC7-201ENST00000277657 C3orf67Q6ZVT6 689 aa26.64■■□□□ 1.85
CCDC7-201ENST00000277657 ZNF512BQ96KM6 892 aaPredicted RBP26.64■■□□□ 1.85
CCDC7-201ENST00000277657 IGHMBP2P38935 993 aaKnown RBP26.63■■□□□ 1.85
CCDC7-201ENST00000277657 PUM3Q15397 648 aaKnown RBP26.63■■□□□ 1.85
CCDC7-201ENST00000277657 NBPF5PQ86XG9 351 aaPredicted RBP26.62■■□□□ 1.85
CCDC7-201ENST00000277657 CDC5LQ99459 802 aaKnown RBP26.62■■□□□ 1.85
CCDC7-201ENST00000277657 GTF2E1P29083 439 aaPredicted RBP26.62■■□□□ 1.85
CCDC7-201ENST00000277657 TPTE2Q6XPS3 522 aa26.62■■□□□ 1.85
CCDC7-201ENST00000277657 IL27Q8NEV9 243 aa26.62■■□□□ 1.85
CCDC7-201ENST00000277657 LPIN2Q92539 896 aa26.62■■□□□ 1.85
CCDC7-201ENST00000277657 COL4A1P02462 1669 aa26.61■■□□□ 1.85
CCDC7-201ENST00000277657 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.61■■□□□ 1.85
CCDC7-201ENST00000277657 MAP4K1Q92918 833 aa26.61■■□□□ 1.85
CCDC7-201ENST00000277657 HMGB2P26583 209 aaKnown RBP26.6■■□□□ 1.85
CCDC7-201ENST00000277657 RXRBP28702 533 aa26.6■■□□□ 1.85
CCDC7-201ENST00000277657 PROM2Q8N271 834 aa26.6■■□□□ 1.85
CCDC7-201ENST00000277657 KCNB2Q92953 911 aa26.6■■□□□ 1.85
CCDC7-201ENST00000277657 SSFA2P28290 1259 aa26.59■■□□□ 1.85
CCDC7-201ENST00000277657 SPRYD3Q8NCJ5 442 aa26.59■■□□□ 1.85
CCDC7-201ENST00000277657 SNX14Q9Y5W7 946 aa26.59■■□□□ 1.85
CCDC7-201ENST00000277657 AKAP11Q9UKA4 1901 aa26.59■■□□□ 1.85
CCDC7-201ENST00000277657 SCARF1Q14162 830 aa26.59■■□□□ 1.85
CCDC7-201ENST00000277657 TXNRD1Q16881 649 aa26.59■■□□□ 1.85
CCDC7-201ENST00000277657 ZNF589Q86UQ0 364 aaPredicted RBP26.59■■□□□ 1.85
CCDC7-201ENST00000277657 HELBQ8NG08 1087 aaPredicted RBP26.59■■□□□ 1.85
CCDC7-201ENST00000277657 CARMIL3Q8ND23 1372 aa26.58■■□□□ 1.85
CCDC7-201ENST00000277657 NEK4P51957 841 aa26.58■■□□□ 1.85
CCDC7-201ENST00000277657 NECTIN1Q15223 517 aa26.58■■□□□ 1.85
CCDC7-201ENST00000277657 DDIT3P35638 169 aa26.57■■□□□ 1.84
CCDC7-201ENST00000277657 RASEFQ8IZ41 740 aa26.57■■□□□ 1.84
CCDC7-201ENST00000277657 PLSCR1O15162 318 aa26.57■■□□□ 1.84
CCDC7-201ENST00000277657 FKBP4Q02790 459 aaKnown RBP eCLIP26.57■■□□□ 1.84
CCDC7-201ENST00000277657 NFIXQ14938 502 aa26.57■■□□□ 1.84
CCDC7-201ENST00000277657 MCMDC2Q4G0Z9 681 aa26.57■■□□□ 1.84
CCDC7-201ENST00000277657 NLRP3Q96P20 1036 aa26.57■■□□□ 1.84
CCDC7-201ENST00000277657 TAF5LO75529 589 aa26.56■■□□□ 1.84
CCDC7-201ENST00000277657 CHGBP05060 677 aa26.56■■□□□ 1.84
CCDC7-201ENST00000277657 SLC5A1P13866 664 aa26.56■■□□□ 1.84
CCDC7-201ENST00000277657 ANKRD18AQ8IVF6 992 aa26.56■■□□□ 1.84
CCDC7-201ENST00000277657 RBM8AQ9Y5S9 174 aaKnown RBP26.56■■□□□ 1.84
CCDC7-201ENST00000277657 ARID4AP29374 1257 aaPredicted RBP26.55■■□□□ 1.84
CCDC7-201ENST00000277657 CCDC102BQ68D86 513 aa26.55■■□□□ 1.84
CCDC7-201ENST00000277657 HELLSQ9NRZ9 838 aa26.55■■□□□ 1.84
CCDC7-201ENST00000277657 BSDC1Q9NW68 430 aaPredicted RBP26.55■■□□□ 1.84
CCDC7-201ENST00000277657 A0A1B0GUL6 1792 aa26.55■■□□□ 1.84
CCDC7-201ENST00000277657 MCAMP43121 646 aa26.55■■□□□ 1.84
CCDC7-201ENST00000277657 ZAP70P43403 619 aa26.55■■□□□ 1.84
CCDC7-201ENST00000277657 CHRNDQ07001 517 aa26.55■■□□□ 1.84
CCDC7-201ENST00000277657 ZMYM1Q5SVZ6 1142 aa26.55■■□□□ 1.84
CCDC7-201ENST00000277657 TAF1P21675 1872 aa26.54■■□□□ 1.84
CCDC7-201ENST00000277657 GYS1P13807 737 aa26.54■■□□□ 1.84
CCDC7-201ENST00000277657 MCM2P49736 904 aa26.54■■□□□ 1.84
CCDC7-201ENST00000277657 RNF113AO15541 343 aaKnown RBP26.53■■□□□ 1.84
CCDC7-201ENST00000277657 UQCRFS1P1P0C7P4 283 aa26.53■■□□□ 1.84
CCDC7-201ENST00000277657 PHKA1P46020 1223 aa26.53■■□□□ 1.84
CCDC7-201ENST00000277657 PRPF40BQ6NWY9 871 aaKnown RBP26.53■■□□□ 1.84
CCDC7-201ENST00000277657 SEC62Q99442 399 aaKnown RBP26.53■■□□□ 1.84
CCDC7-201ENST00000277657 LRRFIP1Q32MZ4 808 aaKnown RBP26.53■■□□□ 1.84
CCDC7-201ENST00000277657 CHMP5Q9NZZ3 219 aa26.53■■□□□ 1.84
CCDC7-201ENST00000277657 CREB3L3Q68CJ9 461 aa26.52■■□□□ 1.84
CCDC7-201ENST00000277657 PI16Q6UXB8 463 aa26.52■■□□□ 1.84
CCDC7-201ENST00000277657 RGS17Q9UGC6 210 aaPredicted RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms