RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
RPS3A-201ENST00000274065 TCERG1O14776 1098 aaKnown RBP11.26□□□□□ -0.61
RPS3A-201ENST00000274065 GTF2E1P29083 439 aaPredicted RBP11.26□□□□□ -0.61
RPS3A-201ENST00000274065 GMPSP49915 693 aaPredicted RBP11.26□□□□□ -0.61
RPS3A-201ENST00000274065 FOSBP53539 338 aa11.26□□□□□ -0.61
RPS3A-201ENST00000274065 HIRAP54198 1017 aaPredicted RBP11.26□□□□□ -0.61
RPS3A-201ENST00000274065 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
RPS3A-201ENST00000274065 DLK2Q6UY11 383 aa11.26□□□□□ -0.61
RPS3A-201ENST00000274065 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
RPS3A-201ENST00000274065 NIM1KQ8IY84 436 aa11.26□□□□□ -0.61
RPS3A-201ENST00000274065 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
RPS3A-201ENST00000274065 PGAP2Q9UHJ9 254 aa11.26□□□□□ -0.61
RPS3A-201ENST00000274065 NPC1L1Q9UHC9 1359 aa11.26□□□□□ -0.61
RPS3A-201ENST00000274065 BTBD11A6QL63 1104 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 PPIP5K2O43314 1243 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 DIAPH1O60610 1272 aaKnown RBP11.25□□□□□ -0.61
RPS3A-201ENST00000274065 HUNKP57058 714 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 CXCL9Q07325 125 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 AOC3Q16853 763 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 TRPM4Q8TD43 1214 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 KCNK17Q96T54 332 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 CEMIPQ8WUJ3 1361 aa11.25□□□□□ -0.61
RPS3A-201ENST00000274065 SIPA1L3O60292 1781 aaPredicted RBP11.24□□□□□ -0.61
RPS3A-201ENST00000274065 FAM155AB1AL88 458 aaPredicted RBP11.24□□□□□ -0.61
RPS3A-201ENST00000274065 HOXA10P31260 410 aaPredicted RBP11.24□□□□□ -0.61
RPS3A-201ENST00000274065 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
RPS3A-201ENST00000274065 RPGRQ92834 1020 aaKnown RBP11.24□□□□□ -0.61
RPS3A-201ENST00000274065 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
RPS3A-201ENST00000274065 SHTN1A0MZ66 631 aa11.23□□□□□ -0.61
RPS3A-201ENST00000274065 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
RPS3A-201ENST00000274065 EVI5O60447 810 aa11.23□□□□□ -0.61
RPS3A-201ENST00000274065 TRPA1O75762 1119 aa11.23□□□□□ -0.61
RPS3A-201ENST00000274065 SNRPA1P09661 255 aaKnown RBP11.23□□□□□ -0.61
RPS3A-201ENST00000274065 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
RPS3A-201ENST00000274065 USP48Q86UV5 1035 aa11.23□□□□□ -0.61
RPS3A-201ENST00000274065 GAS2L2Q8NHY3 880 aa11.23□□□□□ -0.61
RPS3A-201ENST00000274065 ZC3H15Q8WU90 426 aaKnown RBP11.23□□□□□ -0.61
RPS3A-201ENST00000274065 RNF186Q9NXI6 227 aa11.23□□□□□ -0.61
RPS3A-201ENST00000274065 SAGE1Q9NXZ1 904 aa11.23□□□□□ -0.61
RPS3A-201ENST00000274065 KIF23Q02241 960 aaPredicted RBP11.22□□□□□ -0.61
RPS3A-201ENST00000274065 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
RPS3A-201ENST00000274065 RIC1Q4ADV7 1423 aa11.22□□□□□ -0.61
RPS3A-201ENST00000274065 GRIPAP1Q4V328 841 aa11.22□□□□□ -0.61
RPS3A-201ENST00000274065 SLC4A5Q9BY07 1137 aa11.22□□□□□ -0.61
RPS3A-201ENST00000274065 ZNRF3Q9ULT6 936 aa11.22□□□□□ -0.61
RPS3A-201ENST00000274065 RAD17O75943 681 aa11.21□□□□□ -0.61
RPS3A-201ENST00000274065 HSPA5P11021 654 aaKnown RBP11.21□□□□□ -0.61
RPS3A-201ENST00000274065 RGMBQ6NW40 437 aa11.21□□□□□ -0.61
RPS3A-201ENST00000274065 CTU1Q7Z7A3 348 aaKnown RBP11.21□□□□□ -0.61
RPS3A-201ENST00000274065 CRAMP1Q96RY5 1269 aa11.21□□□□□ -0.61
RPS3A-201ENST00000274065 NYXQ9GZU5 481 aa11.21□□□□□ -0.61
RPS3A-201ENST00000274065 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
RPS3A-201ENST00000274065 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
RPS3A-201ENST00000274065 UBN2Q6ZU65 1347 aa11.2□□□□□ -0.62
RPS3A-201ENST00000274065 U2SURPO15042 1029 aaKnown RBP11.2□□□□□ -0.62
RPS3A-201ENST00000274065 GPTP24298 496 aa11.2□□□□□ -0.62
RPS3A-201ENST00000274065 RBM17Q96I25 401 aaKnown RBP11.2□□□□□ -0.62
RPS3A-201ENST00000274065 PHACTR3Q96KR7 559 aa11.2□□□□□ -0.62
RPS3A-201ENST00000274065 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
RPS3A-201ENST00000274065 HCSTQ9UBK5 93 aa11.2□□□□□ -0.62
RPS3A-201ENST00000274065 CDHR2Q9BYE9 1310 aa11.19□□□□□ -0.62
RPS3A-201ENST00000274065 SUSD4Q5VX71 490 aa11.19□□□□□ -0.62
RPS3A-201ENST00000274065 NGEFQ8N5V2 710 aa11.19□□□□□ -0.62
RPS3A-201ENST00000274065 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
RPS3A-201ENST00000274065 CSRNP1Q96S65 589 aa11.19□□□□□ -0.62
RPS3A-201ENST00000274065 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
RPS3A-201ENST00000274065 GBA2Q9HCG7 927 aaPredicted RBP11.19□□□□□ -0.62
RPS3A-201ENST00000274065 CNOT7Q9UIV1 285 aaKnown RBP11.19□□□□□ -0.62
RPS3A-201ENST00000274065 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
RPS3A-201ENST00000274065 ATP6V0A2Q9Y487 856 aa11.19□□□□□ -0.62
RPS3A-201ENST00000274065 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
RPS3A-201ENST00000274065 YDJCA8MPS7 323 aa11.18□□□□□ -0.62
RPS3A-201ENST00000274065 ZNF157P51786 506 aaPredicted RBP11.18□□□□□ -0.62
RPS3A-201ENST00000274065 EIF4G2P78344 907 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPS3A-201ENST00000274065 MAP3K9P80192 1104 aa11.18□□□□□ -0.62
RPS3A-201ENST00000274065 TTLL7Q6ZT98 887 aa11.18□□□□□ -0.62
RPS3A-201ENST00000274065 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
RPS3A-201ENST00000274065 CCDC102AQ96A19 550 aa11.18□□□□□ -0.62
RPS3A-201ENST00000274065 VPS33BQ9H267 617 aa11.18□□□□□ -0.62
RPS3A-201ENST00000274065 ERVV-1B6SEH8 477 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 ADM5C9JUS6 153 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 H7C1D1 291 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 NTSR2O95665 410 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 EGFRP00533 1210 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 SLC10A3P09131 477 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 KIAA2012Q0VF49 1180 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 HABP4Q5JVS0 413 aaKnown RBP11.17□□□□□ -0.62
RPS3A-201ENST00000274065 MCM10Q7L590 875 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 KRT26Q7Z3Y9 468 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 C2orf69Q8N8R5 385 aa11.17□□□□□ -0.62
RPS3A-201ENST00000274065 IBTKQ9P2D0 1353 aaPredicted RBP11.16□□□□□ -0.62
RPS3A-201ENST00000274065 ABCC4O15439 1325 aa11.16□□□□□ -0.62
RPS3A-201ENST00000274065 MAP3K15Q6ZN16 1313 aa11.16□□□□□ -0.62
RPS3A-201ENST00000274065 PTPREP23469 700 aa11.16□□□□□ -0.62
RPS3A-201ENST00000274065 PRKAR2BP31323 418 aa11.16□□□□□ -0.62
RPS3A-201ENST00000274065 CAMK2BQ13554 666 aa11.16□□□□□ -0.62
RPS3A-201ENST00000274065 DCTN1Q14203 1278 aa11.16□□□□□ -0.62
RPS3A-201ENST00000274065 TNIP1Q15025 636 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms