RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 NYXQ9GZU5 481 aa24.86■■□□□ 1.57
LYSMD2-201ENST00000267838 LSG1Q9H089 658 aaKnown RBP24.86■■□□□ 1.57
LYSMD2-201ENST00000267838 NDUFB9Q9Y6M9 179 aa24.86■■□□□ 1.57
LYSMD2-201ENST00000267838 RFX7Q2KHR2 1363 aa24.86■■□□□ 1.57
LYSMD2-201ENST00000267838 RAD50Q92878 1312 aa24.86■■□□□ 1.57
LYSMD2-201ENST00000267838 ADORA1P30542 326 aa24.85■■□□□ 1.57
LYSMD2-201ENST00000267838 CCDC158Q5M9N0 1113 aa24.85■■□□□ 1.57
LYSMD2-201ENST00000267838 UBR3Q6ZT12 1888 aa24.85■■□□□ 1.57
LYSMD2-201ENST00000267838 CASZ1Q86V15 1759 aa24.85■■□□□ 1.57
LYSMD2-201ENST00000267838 MROH5Q6ZUA9 1318 aa24.85■■□□□ 1.57
LYSMD2-201ENST00000267838 ADRA2BP18089 450 aa24.85■■□□□ 1.57
LYSMD2-201ENST00000267838 RXRBP28702 533 aa24.85■■□□□ 1.57
LYSMD2-201ENST00000267838 GORABQ5T7V8 394 aa24.85■■□□□ 1.57
LYSMD2-201ENST00000267838 FAM227BQ96M60 508 aa24.85■■□□□ 1.57
LYSMD2-201ENST00000267838 PDE8BO95263 885 aa24.84■■□□□ 1.57
LYSMD2-201ENST00000267838 IFIT1P09914 478 aaKnown RBP24.84■■□□□ 1.57
LYSMD2-201ENST00000267838 GTF2E1P29083 439 aaPredicted RBP24.84■■□□□ 1.57
LYSMD2-201ENST00000267838 ANAPC15P60006 121 aa24.84■■□□□ 1.57
LYSMD2-201ENST00000267838 SLC10A5Q5PT55 438 aa24.84■■□□□ 1.57
LYSMD2-201ENST00000267838 POTEAQ6S8J7 498 aa24.84■■□□□ 1.57
LYSMD2-201ENST00000267838 MPHOSPH8Q99549 860 aa24.84■■□□□ 1.57
LYSMD2-201ENST00000267838 SPEF2Q9C093 1822 aa24.84■■□□□ 1.57
LYSMD2-201ENST00000267838 CD2BP2O95400 341 aaKnown RBP24.83■■□□□ 1.57
LYSMD2-201ENST00000267838 TTC39AQ5SRH9 613 aa24.83■■□□□ 1.57
LYSMD2-201ENST00000267838 PAG1Q9NWQ8 432 aa24.83■■□□□ 1.57
LYSMD2-201ENST00000267838 HSPA4P34932 840 aa24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 IGHMBP2P38935 993 aaKnown RBP24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 SF3B3Q15393 1217 aaKnown RBP24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 DDX46Q7L014 1031 aaKnown RBP24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 NBPF5PQ86XG9 351 aaPredicted RBP24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 SNRKQ9NRH2 765 aa24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 PALD1Q9ULE6 856 aa24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 ABCC12Q96J65 1359 aa24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 KBTBD3Q8NAB2 608 aa24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 IL17RAQ96F46 866 aa24.82■■□□□ 1.56
LYSMD2-201ENST00000267838 A0A0D9SFI3 127 aa24.81■■□□□ 1.56
LYSMD2-201ENST00000267838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.8■■□□□ 1.56
LYSMD2-201ENST00000267838 GOLIM4O00461 696 aa24.8■■□□□ 1.56
LYSMD2-201ENST00000267838 TPTE2Q6XPS3 522 aa24.8■■□□□ 1.56
LYSMD2-201ENST00000267838 C3orf67Q6ZVT6 689 aa24.8■■□□□ 1.56
LYSMD2-201ENST00000267838 CDC5LQ99459 802 aaKnown RBP24.8■■□□□ 1.56
LYSMD2-201ENST00000267838 K7ELQ4 463 aaPredicted RBP24.8■■□□□ 1.56
LYSMD2-201ENST00000267838 PUM3Q15397 648 aaKnown RBP24.8■■□□□ 1.56
LYSMD2-201ENST00000267838 TXNRD1Q16881 649 aa24.8■■□□□ 1.56
LYSMD2-201ENST00000267838 SLKQ9H2G2 1235 aaPredicted RBP24.8■■□□□ 1.56
LYSMD2-201ENST00000267838 ARAP2Q8WZ64 1704 aa24.79■■□□□ 1.56
LYSMD2-201ENST00000267838 HMGB2P26583 209 aaKnown RBP24.79■■□□□ 1.56
LYSMD2-201ENST00000267838 ILDR1Q86SU0 546 aaPredicted RBP24.79■■□□□ 1.56
LYSMD2-201ENST00000267838 TICAM2Q86XR7 235 aa24.79■■□□□ 1.56
LYSMD2-201ENST00000267838 MED23Q9ULK4 1368 aa24.78■■□□□ 1.56
LYSMD2-201ENST00000267838 ST18O60284 1047 aa24.78■■□□□ 1.56
LYSMD2-201ENST00000267838 PTH1RQ03431 593 aa24.78■■□□□ 1.56
LYSMD2-201ENST00000267838 SPRYD3Q8NCJ5 442 aa24.78■■□□□ 1.56
LYSMD2-201ENST00000267838 HELBQ8NG08 1087 aaPredicted RBP24.78■■□□□ 1.56
LYSMD2-201ENST00000267838 ANTXR1Q9H6X2 564 aa24.78■■□□□ 1.56
LYSMD2-201ENST00000267838 CCDC171Q6TFL3 1326 aa24.78■■□□□ 1.56
LYSMD2-201ENST00000267838 FGFR2P21802 821 aa24.77■■□□□ 1.56
LYSMD2-201ENST00000267838 SSFA2P28290 1259 aa24.77■■□□□ 1.56
LYSMD2-201ENST00000267838 PROM2Q8N271 834 aa24.77■■□□□ 1.56
LYSMD2-201ENST00000267838 LPIN2Q92539 896 aa24.77■■□□□ 1.56
LYSMD2-201ENST00000267838 COL4A1P02462 1669 aa24.77■■□□□ 1.56
LYSMD2-201ENST00000267838 CARMIL3Q8ND23 1372 aa24.76■■□□□ 1.55
LYSMD2-201ENST00000267838 ZNF512BQ96KM6 892 aaPredicted RBP24.76■■□□□ 1.55
LYSMD2-201ENST00000267838 NLRP3Q96P20 1036 aa24.76■■□□□ 1.55
LYSMD2-201ENST00000267838 PLSCR1O15162 318 aa24.75■■□□□ 1.55
LYSMD2-201ENST00000267838 FKBP4Q02790 459 aaKnown RBP eCLIP24.75■■□□□ 1.55
LYSMD2-201ENST00000267838 NFIXQ14938 502 aa24.75■■□□□ 1.55
LYSMD2-201ENST00000267838 ANKRD18AQ8IVF6 992 aa24.75■■□□□ 1.55
LYSMD2-201ENST00000267838 TAF5LO75529 589 aa24.75■■□□□ 1.55
LYSMD2-201ENST00000267838 SLC5A1P13866 664 aa24.75■■□□□ 1.55
LYSMD2-201ENST00000267838 SCARF1Q14162 830 aa24.75■■□□□ 1.55
LYSMD2-201ENST00000267838 EP400Q96L91 3159 aa24.74■■□□□ 1.55
LYSMD2-201ENST00000267838 ZNF589Q86UQ0 364 aaPredicted RBP24.74■■□□□ 1.55
LYSMD2-201ENST00000267838 MAP4K1Q92918 833 aa24.74■■□□□ 1.55
LYSMD2-201ENST00000267838 SNX14Q9Y5W7 946 aa24.74■■□□□ 1.55
LYSMD2-201ENST00000267838 TAF1P21675 1872 aa24.74■■□□□ 1.55
LYSMD2-201ENST00000267838 APBA3O96018 575 aa24.73■■□□□ 1.55
LYSMD2-201ENST00000267838 NEK4P51957 841 aa24.73■■□□□ 1.55
LYSMD2-201ENST00000267838 CHRNDQ07001 517 aa24.73■■□□□ 1.55
LYSMD2-201ENST00000267838 AKAP11Q9UKA4 1901 aa24.73■■□□□ 1.55
LYSMD2-201ENST00000267838 CHGBP05060 677 aa24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 GYS1P13807 737 aa24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 MCMDC2Q4G0Z9 681 aa24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 CCDC102BQ68D86 513 aa24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 NPHP1O15259 732 aa24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 MCAMP43121 646 aa24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 ZAP70P43403 619 aa24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 CCDC24Q8N4L8 307 aa24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 IL27Q8NEV9 243 aa24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 BSDC1Q9NW68 430 aaPredicted RBP24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 RBM8AQ9Y5S9 174 aaKnown RBP24.72■■□□□ 1.55
LYSMD2-201ENST00000267838 A0A1B0GUL6 1792 aa24.71■■□□□ 1.55
LYSMD2-201ENST00000267838 UQCRFS1P1P0C7P4 283 aa24.71■■□□□ 1.55
LYSMD2-201ENST00000267838 ARID4AP29374 1257 aaPredicted RBP24.71■■□□□ 1.55
LYSMD2-201ENST00000267838 PHKA1P46020 1223 aa24.71■■□□□ 1.55
LYSMD2-201ENST00000267838 NECTIN1Q15223 517 aa24.71■■□□□ 1.55
LYSMD2-201ENST00000267838 RASEFQ8IZ41 740 aa24.71■■□□□ 1.55
LYSMD2-201ENST00000267838 KCNB2Q92953 911 aa24.71■■□□□ 1.55
LYSMD2-201ENST00000267838 HELLSQ9NRZ9 838 aa24.71■■□□□ 1.55
LYSMD2-201ENST00000267838 TNRC6CQ9HCJ0 1690 aaKnown RBP24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms