RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 DDX46Q7L014 1031 aaKnown RBP27.06■■□□□ 1.92
SIX3-201ENST00000260653 SPRYD3Q8NCJ5 442 aa27.06■■□□□ 1.92
SIX3-201ENST00000260653 SLKQ9H2G2 1235 aaPredicted RBP27.06■■□□□ 1.92
SIX3-201ENST00000260653 RTL9Q8NET4 1388 aa27.06■■□□□ 1.92
SIX3-201ENST00000260653 ABCC12Q96J65 1359 aa27.06■■□□□ 1.92
SIX3-201ENST00000260653 UBR3Q6ZT12 1888 aa27.06■■□□□ 1.92
SIX3-201ENST00000260653 SLC27A3Q5K4L6 730 aa27.06■■□□□ 1.92
SIX3-201ENST00000260653 SPEF2Q9C093 1822 aa27.05■■□□□ 1.92
SIX3-201ENST00000260653 A0A0D9SFI3 127 aa27.05■■□□□ 1.92
SIX3-201ENST00000260653 EPB41L2O43491 1005 aaKnown RBP27.05■■□□□ 1.92
SIX3-201ENST00000260653 CASZ1Q86V15 1759 aa27.05■■□□□ 1.92
SIX3-201ENST00000260653 GORABQ5T7V8 394 aa27.05■■□□□ 1.92
SIX3-201ENST00000260653 KIAA1211Q6ZU35 1233 aa27.05■■□□□ 1.92
SIX3-201ENST00000260653 PDE8BO95263 885 aa27.04■■□□□ 1.92
SIX3-201ENST00000260653 COL4A1P02462 1669 aa27.04■■□□□ 1.92
SIX3-201ENST00000260653 IFIT1P09914 478 aaKnown RBP27.04■■□□□ 1.92
SIX3-201ENST00000260653 GTF2E1P29083 439 aaPredicted RBP27.04■■□□□ 1.92
SIX3-201ENST00000260653 MPHOSPH8Q99549 860 aa27.04■■□□□ 1.92
SIX3-201ENST00000260653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.03■■□□□ 1.92
SIX3-201ENST00000260653 GOLIM4O00461 696 aa27.03■■□□□ 1.92
SIX3-201ENST00000260653 CCDC158Q5M9N0 1113 aa27.03■■□□□ 1.92
SIX3-201ENST00000260653 NBPF5PQ86XG9 351 aaPredicted RBP27.03■■□□□ 1.92
SIX3-201ENST00000260653 HELBQ8NG08 1087 aaPredicted RBP27.03■■□□□ 1.92
SIX3-201ENST00000260653 PAG1Q9NWQ8 432 aa27.03■■□□□ 1.92
SIX3-201ENST00000260653 HSPA4P34932 840 aa27.03■■□□□ 1.92
SIX3-201ENST00000260653 NYXQ9GZU5 481 aa27.03■■□□□ 1.92
SIX3-201ENST00000260653 MROH5Q6ZUA9 1318 aa27.02■■□□□ 1.92
SIX3-201ENST00000260653 TTC39AQ5SRH9 613 aa27.02■■□□□ 1.92
SIX3-201ENST00000260653 CHGBP05060 677 aa27.01■■□□□ 1.92
SIX3-201ENST00000260653 RXRBP28702 533 aa27.01■■□□□ 1.92
SIX3-201ENST00000260653 PTH1RQ03431 593 aa27.01■■□□□ 1.92
SIX3-201ENST00000260653 PROM2Q8N271 834 aa27.01■■□□□ 1.91
SIX3-201ENST00000260653 KBTBD3Q8NAB2 608 aa27.01■■□□□ 1.91
SIX3-201ENST00000260653 RFX7Q2KHR2 1363 aa27.01■■□□□ 1.91
SIX3-201ENST00000260653 ADRA2BP18089 450 aa27■■□□□ 1.91
SIX3-201ENST00000260653 IGHMBP2P38935 993 aaKnown RBP27■■□□□ 1.91
SIX3-201ENST00000260653 ANAPC15P60006 121 aa27■■□□□ 1.91
SIX3-201ENST00000260653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27■■□□□ 1.91
SIX3-201ENST00000260653 SF3B3Q15393 1217 aaKnown RBP27■■□□□ 1.91
SIX3-201ENST00000260653 TXNRD1Q16881 649 aa27■■□□□ 1.91
SIX3-201ENST00000260653 SLC10A5Q5PT55 438 aa27■■□□□ 1.91
SIX3-201ENST00000260653 TAF1P21675 1872 aa27■■□□□ 1.91
SIX3-201ENST00000260653 K7ELQ4 463 aaPredicted RBP26.99■■□□□ 1.91
SIX3-201ENST00000260653 CCDC24Q8N4L8 307 aa26.99■■□□□ 1.91
SIX3-201ENST00000260653 SNRKQ9NRH2 765 aa26.99■■□□□ 1.91
SIX3-201ENST00000260653 MED23Q9ULK4 1368 aa26.99■■□□□ 1.91
SIX3-201ENST00000260653 SCARF1Q14162 830 aa26.99■■□□□ 1.91
SIX3-201ENST00000260653 ANTXR1Q9H6X2 564 aa26.99■■□□□ 1.91
SIX3-201ENST00000260653 CCDC171Q6TFL3 1326 aa26.99■■□□□ 1.91
SIX3-201ENST00000260653 PUM3Q15397 648 aaKnown RBP26.98■■□□□ 1.91
SIX3-201ENST00000260653 ZNF589Q86UQ0 364 aaPredicted RBP26.98■■□□□ 1.91
SIX3-201ENST00000260653 TAF5LO75529 589 aa26.97■■□□□ 1.91
SIX3-201ENST00000260653 FKBP4Q02790 459 aaKnown RBP eCLIP26.97■■□□□ 1.91
SIX3-201ENST00000260653 TPTE2Q6XPS3 522 aa26.97■■□□□ 1.91
SIX3-201ENST00000260653 IL17RAQ96F46 866 aa26.97■■□□□ 1.91
SIX3-201ENST00000260653 CDC5LQ99459 802 aaKnown RBP26.97■■□□□ 1.91
SIX3-201ENST00000260653 SNAP23O00161 211 aa26.97■■□□□ 1.91
SIX3-201ENST00000260653 FGFR2P21802 821 aa26.97■■□□□ 1.91
SIX3-201ENST00000260653 NFIXQ14938 502 aa26.96■■□□□ 1.91
SIX3-201ENST00000260653 PI16Q6UXB8 463 aa26.96■■□□□ 1.91
SIX3-201ENST00000260653 RGS17Q9UGC6 210 aaPredicted RBP26.96■■□□□ 1.91
SIX3-201ENST00000260653 ST18O60284 1047 aa26.95■■□□□ 1.91
SIX3-201ENST00000260653 LPIN2Q92539 896 aa26.95■■□□□ 1.91
SIX3-201ENST00000260653 CARMIL3Q8ND23 1372 aa26.95■■□□□ 1.9
SIX3-201ENST00000260653 ARAP2Q8WZ64 1704 aa26.95■■□□□ 1.9
SIX3-201ENST00000260653 SSFA2P28290 1259 aa26.95■■□□□ 1.9
SIX3-201ENST00000260653 NEK4P51957 841 aa26.94■■□□□ 1.9
SIX3-201ENST00000260653 SLFNL1Q499Z3 407 aa26.94■■□□□ 1.9
SIX3-201ENST00000260653 RASEFQ8IZ41 740 aa26.94■■□□□ 1.9
SIX3-201ENST00000260653 SEC62Q99442 399 aaKnown RBP26.94■■□□□ 1.9
SIX3-201ENST00000260653 SNX14Q9Y5W7 946 aa26.94■■□□□ 1.9
SIX3-201ENST00000260653 AKAP11Q9UKA4 1901 aa26.94■■□□□ 1.9
SIX3-201ENST00000260653 APBA3O96018 575 aa26.93■■□□□ 1.9
SIX3-201ENST00000260653 MCAMP43121 646 aa26.93■■□□□ 1.9
SIX3-201ENST00000260653 CHRNDQ07001 517 aa26.93■■□□□ 1.9
SIX3-201ENST00000260653 NBR1Q14596 966 aa26.93■■□□□ 1.9
SIX3-201ENST00000260653 ANKRD18AQ8IVF6 992 aa26.93■■□□□ 1.9
SIX3-201ENST00000260653 NLRP3Q96P20 1036 aa26.93■■□□□ 1.9
SIX3-201ENST00000260653 GYS1P13807 737 aa26.93■■□□□ 1.9
SIX3-201ENST00000260653 ZAP70P43403 619 aa26.93■■□□□ 1.9
SIX3-201ENST00000260653 PHKA1P46020 1223 aa26.93■■□□□ 1.9
SIX3-201ENST00000260653 NPHP1O15259 732 aa26.92■■□□□ 1.9
SIX3-201ENST00000260653 CCDC102BQ68D86 513 aa26.92■■□□□ 1.9
SIX3-201ENST00000260653 MAP4K1Q92918 833 aa26.92■■□□□ 1.9
SIX3-201ENST00000260653 UPF3BQ9BZI7 483 aaKnown RBP26.92■■□□□ 1.9
SIX3-201ENST00000260653 SLC5A1P13866 664 aa26.92■■□□□ 1.9
SIX3-201ENST00000260653 CCDC129Q6ZRS4 1044 aa26.92■■□□□ 1.9
SIX3-201ENST00000260653 CELF1Q92879 486 aaKnown RBP26.92■■□□□ 1.9
SIX3-201ENST00000260653 RBM8AQ9Y5S9 174 aaKnown RBP26.92■■□□□ 1.9
SIX3-201ENST00000260653 PLSCR1O15162 318 aa26.91■■□□□ 1.9
SIX3-201ENST00000260653 PRPF40BQ6NWY9 871 aaKnown RBP26.91■■□□□ 1.9
SIX3-201ENST00000260653 TNRC6CQ9HCJ0 1690 aaKnown RBP26.91■■□□□ 1.9
SIX3-201ENST00000260653 POTEAQ6S8J7 498 aa26.91■■□□□ 1.9
SIX3-201ENST00000260653 ZNF512BQ96KM6 892 aaPredicted RBP26.91■■□□□ 1.9
SIX3-201ENST00000260653 MCMDC2Q4G0Z9 681 aa26.9■■□□□ 1.9
SIX3-201ENST00000260653 NECTIN1Q15223 517 aa26.9■■□□□ 1.9
SIX3-201ENST00000260653 BSDC1Q9NW68 430 aaPredicted RBP26.89■■□□□ 1.9
SIX3-201ENST00000260653 A0A1B0GUL6 1792 aa26.89■■□□□ 1.9
SIX3-201ENST00000260653 KCNJ4P48050 445 aa26.89■■□□□ 1.89
SIX3-201ENST00000260653 FOXD4L1Q9NU39 408 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms