RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 FOXD4L6Q3SYB3 417 aaPredicted RBP26.08■■□□□ 1.77
RNF39-201ENST00000244360 FOXD4L3Q6VB84 417 aaPredicted RBP26.08■■□□□ 1.77
RNF39-201ENST00000244360 CCDC129Q6ZRS4 1044 aa26.08■■□□□ 1.77
RNF39-201ENST00000244360 SEC62Q99442 399 aaKnown RBP26.08■■□□□ 1.77
RNF39-201ENST00000244360 CNPY2Q9Y2B0 182 aa26.08■■□□□ 1.77
RNF39-201ENST00000244360 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.08■■□□□ 1.77
RNF39-201ENST00000244360 COL22A1Q8NFW1 1626 aaPredicted RBP26.08■■□□□ 1.77
RNF39-201ENST00000244360 MAP3K15Q6ZN16 1313 aa26.08■■□□□ 1.76
RNF39-201ENST00000244360 TCHHQ07283 1943 aa26.07■■□□□ 1.76
RNF39-201ENST00000244360 A0A1B0GUL7 405 aa26.07■■□□□ 1.76
RNF39-201ENST00000244360 ZNF500O60304 480 aaPredicted RBP26.07■■□□□ 1.76
RNF39-201ENST00000244360 TERF1P54274 439 aa26.07■■□□□ 1.76
RNF39-201ENST00000244360 PUS3Q9BZE2 481 aaKnown RBP26.07■■□□□ 1.76
RNF39-201ENST00000244360 GOLIM4O00461 696 aa26.07■■□□□ 1.76
RNF39-201ENST00000244360 CSF1RP07333 972 aa26.07■■□□□ 1.76
RNF39-201ENST00000244360 KLHL34Q8N239 644 aa26.07■■□□□ 1.76
RNF39-201ENST00000244360 CCDC39Q9UFE4 941 aa26.07■■□□□ 1.76
RNF39-201ENST00000244360 CCDC57Q2TAC2 916 aa26.06■■□□□ 1.76
RNF39-201ENST00000244360 ZMYM1Q5SVZ6 1142 aa26.06■■□□□ 1.76
RNF39-201ENST00000244360 ZBTB38Q8NAP3 1195 aaPredicted RBP26.06■■□□□ 1.76
RNF39-201ENST00000244360 GIGYF2Q6Y7W6 1299 aaKnown RBP26.06■■□□□ 1.76
RNF39-201ENST00000244360 CEP126Q9P2H0 1117 aa26.06■■□□□ 1.76
RNF39-201ENST00000244360 COL16A1Q07092 1604 aaPredicted RBP26.06■■□□□ 1.76
RNF39-201ENST00000244360 TCEANC2Q96MN5 208 aa26.05■■□□□ 1.76
RNF39-201ENST00000244360 NEK1Q96PY6 1258 aa26.05■■□□□ 1.76
RNF39-201ENST00000244360 CDHR2Q9BYE9 1310 aa26.05■■□□□ 1.76
RNF39-201ENST00000244360 CYP21A2P08686 494 aa26.04■■□□□ 1.76
RNF39-201ENST00000244360 DSCC1Q9BVC3 393 aa26.04■■□□□ 1.76
RNF39-201ENST00000244360 AHDC1Q5TGY3 1603 aaPredicted RBP26.04■■□□□ 1.76
RNF39-201ENST00000244360 RRP9O43818 475 aaKnown RBP26.04■■□□□ 1.76
RNF39-201ENST00000244360 CCDC9Q9Y3X0 531 aaKnown RBP26.04■■□□□ 1.76
RNF39-201ENST00000244360 IFIT1P09914 478 aaKnown RBP26.03■■□□□ 1.76
RNF39-201ENST00000244360 UBE2HP62256 183 aa26.03■■□□□ 1.76
RNF39-201ENST00000244360 FAM184AQ8NB25 1140 aa26.03■■□□□ 1.76
RNF39-201ENST00000244360 ZKSCAN5Q9Y2L8 839 aa26.03■■□□□ 1.76
RNF39-201ENST00000244360 ZNF330Q9Y3S2 320 aaPredicted RBP26.03■■□□□ 1.76
RNF39-201ENST00000244360 WNK3Q9BYP7 1800 aa26.03■■□□□ 1.76
RNF39-201ENST00000244360 PDCP20941 246 aa26.03■■□□□ 1.76
RNF39-201ENST00000244360 SLC4A9Q96Q91 983 aa26.03■■□□□ 1.76
RNF39-201ENST00000244360 AKAP2Q9Y2D5 859 aa26.03■■□□□ 1.76
RNF39-201ENST00000244360 CYP19A1P11511 503 aaPredicted RBP26.02■■□□□ 1.76
RNF39-201ENST00000244360 FAM89AQ96GI7 184 aa26.02■■□□□ 1.76
RNF39-201ENST00000244360 LETM1O95202 739 aaPredicted RBP26.02■■□□□ 1.76
RNF39-201ENST00000244360 CSPP1Q1MSJ5 1256 aa26.02■■□□□ 1.76
RNF39-201ENST00000244360 HSP90AB3PQ58FF7 597 aa26.01■■□□□ 1.75
RNF39-201ENST00000244360 ANKRD36CQ5JPF3 1778 aa26.01■■□□□ 1.75
RNF39-201ENST00000244360 UBE2Q2Q8WVN8 375 aa26.01■■□□□ 1.75
RNF39-201ENST00000244360 RNF113AO15541 343 aaKnown RBP26■■□□□ 1.75
RNF39-201ENST00000244360 PRKCSHP14314 528 aaPredicted RBP26■■□□□ 1.75
RNF39-201ENST00000244360 UVSSAQ2YD98 709 aa26■■□□□ 1.75
RNF39-201ENST00000244360 LARP1BQ659C4 914 aaKnown RBP26■■□□□ 1.75
RNF39-201ENST00000244360 ROBO1Q9Y6N7 1651 aa26■■□□□ 1.75
RNF39-201ENST00000244360 NLRP10Q86W26 655 aa26■■□□□ 1.75
RNF39-201ENST00000244360 RIC1Q4ADV7 1423 aa25.99■■□□□ 1.75
RNF39-201ENST00000244360 ABCC12Q96J65 1359 aa25.99■■□□□ 1.75
RNF39-201ENST00000244360 VPS37CA5D8V6 355 aaPredicted RBP25.99■■□□□ 1.75
RNF39-201ENST00000244360 GTF3C6Q969F1 213 aa25.99■■□□□ 1.75
RNF39-201ENST00000244360 MAST3O60307 1309 aa25.99■■□□□ 1.75
RNF39-201ENST00000244360 HMGB1P09429 215 aaKnown RBP25.99■■□□□ 1.75
RNF39-201ENST00000244360 DNM1Q05193 864 aaKnown RBP25.99■■□□□ 1.75
RNF39-201ENST00000244360 IFIT5Q13325 482 aaKnown RBP25.99■■□□□ 1.75
RNF39-201ENST00000244360 HLFQ16534 295 aa25.99■■□□□ 1.75
RNF39-201ENST00000244360 CCDC183Q5T5S1 534 aa25.99■■□□□ 1.75
RNF39-201ENST00000244360 STOX1Q6ZVD7 989 aa25.99■■□□□ 1.75
RNF39-201ENST00000244360 DTNBO60941 627 aa25.98■■□□□ 1.75
RNF39-201ENST00000244360 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.98■■□□□ 1.75
RNF39-201ENST00000244360 FIBPO43427 364 aa25.98■■□□□ 1.75
RNF39-201ENST00000244360 SLFNL1Q499Z3 407 aa25.98■■□□□ 1.75
RNF39-201ENST00000244360 CCDC158Q5M9N0 1113 aa25.98■■□□□ 1.75
RNF39-201ENST00000244360 XAGE2Q96GT9 111 aa25.98■■□□□ 1.75
RNF39-201ENST00000244360 Q6ZUG5 572 aa25.97■■□□□ 1.75
RNF39-201ENST00000244360 EXOC5O00471 708 aa25.96■■□□□ 1.75
RNF39-201ENST00000244360 ADORA1P30542 326 aa25.96■■□□□ 1.75
RNF39-201ENST00000244360 HSP90AA2PQ14568 343 aaPredicted RBP25.96■■□□□ 1.75
RNF39-201ENST00000244360 CDC37L1Q7L3B6 337 aa25.96■■□□□ 1.75
RNF39-201ENST00000244360 HSPD1P10809 573 aaKnown RBP25.96■■□□□ 1.75
RNF39-201ENST00000244360 LAMA4Q16363 1823 aa25.95■■□□□ 1.75
RNF39-201ENST00000244360 LRRFIP1Q32MZ4 808 aaKnown RBP25.95■■□□□ 1.75
RNF39-201ENST00000244360 RNF214Q8ND24 703 aa25.95■■□□□ 1.75
RNF39-201ENST00000244360 ZBTB1Q9Y2K1 713 aa25.95■■□□□ 1.75
RNF39-201ENST00000244360 TAF7LQ5H9L4 462 aa25.95■■□□□ 1.74
RNF39-201ENST00000244360 TTC39AQ5SRH9 613 aa25.95■■□□□ 1.74
RNF39-201ENST00000244360 DHX32Q7L7V1 743 aaKnown RBP25.95■■□□□ 1.74
RNF39-201ENST00000244360 TTLL11Q8NHH1 800 aa25.95■■□□□ 1.74
RNF39-201ENST00000244360 RIPOR2Q9Y4F9 1068 aa25.95■■□□□ 1.74
RNF39-201ENST00000244360 ERVV-1B6SEH8 477 aa25.94■■□□□ 1.74
RNF39-201ENST00000244360 AGXT2Q9BYV1 514 aa25.94■■□□□ 1.74
RNF39-201ENST00000244360 ZFYP08048 801 aaPredicted RBP25.94■■□□□ 1.74
RNF39-201ENST00000244360 CTSWP56202 376 aa25.94■■□□□ 1.74
RNF39-201ENST00000244360 STK3Q13188 491 aa25.94■■□□□ 1.74
RNF39-201ENST00000244360 SYNE4Q8N205 404 aa25.94■■□□□ 1.74
RNF39-201ENST00000244360 M0R2C6 588 aa25.93■■□□□ 1.74
RNF39-201ENST00000244360 GPTP24298 496 aa25.93■■□□□ 1.74
RNF39-201ENST00000244360 IL6STP40189 918 aaPredicted RBP25.93■■□□□ 1.74
RNF39-201ENST00000244360 EXOSC10Q01780 885 aaKnown RBP25.93■■□□□ 1.74
RNF39-201ENST00000244360 CCDC85AQ96PX6 553 aaPredicted RBP25.93■■□□□ 1.74
RNF39-201ENST00000244360 ELP1O95163 1332 aa25.93■■□□□ 1.74
RNF39-201ENST00000244360 DOT1LQ8TEK3 1739 aa25.93■■□□□ 1.74
RNF39-201ENST00000244360 GORABQ5T7V8 394 aa25.92■■□□□ 1.74
RNF39-201ENST00000244360 MYH3P11055 1940 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms