RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CHMP4CQ96CF2 233 aa26.04■■□□□ 1.76
SMARCD2-201ENST00000225742 TCEANC2Q96MN5 208 aa26.04■■□□□ 1.76
SMARCD2-201ENST00000225742 TPM2P07951 284 aa26.04■■□□□ 1.76
SMARCD2-201ENST00000225742 COL9A3Q14050 684 aaPredicted RBP26.04■■□□□ 1.76
SMARCD2-201ENST00000225742 CCDC129Q6ZRS4 1044 aa26.04■■□□□ 1.76
SMARCD2-201ENST00000225742 Q6ZUG5 572 aa26.04■■□□□ 1.76
SMARCD2-201ENST00000225742 ZBTB3Q9H5J0 574 aa26.04■■□□□ 1.76
SMARCD2-201ENST00000225742 SLAIN2Q9P270 581 aa26.04■■□□□ 1.76
SMARCD2-201ENST00000225742 TCIRG1Q13488 830 aa26.03■■□□□ 1.76
SMARCD2-201ENST00000225742 VSIG10Q8N0Z9 540 aa26.03■■□□□ 1.76
SMARCD2-201ENST00000225742 SEC62Q99442 399 aaKnown RBP26.03■■□□□ 1.76
SMARCD2-201ENST00000225742 GOLIM4O00461 696 aa26.02■■□□□ 1.76
SMARCD2-201ENST00000225742 PLA2G12BQ9BX93 195 aa26.02■■□□□ 1.76
SMARCD2-201ENST00000225742 NDUFB9Q9Y6M9 179 aa26.02■■□□□ 1.76
SMARCD2-201ENST00000225742 RNF113AO15541 343 aaKnown RBP26.02■■□□□ 1.76
SMARCD2-201ENST00000225742 IFIT1P09914 478 aaKnown RBP26.02■■□□□ 1.76
SMARCD2-201ENST00000225742 DHX32Q7L7V1 743 aaKnown RBP26.02■■□□□ 1.76
SMARCD2-201ENST00000225742 TTC6Q86TZ1 520 aa26.02■■□□□ 1.76
SMARCD2-201ENST00000225742 AKAP2Q9Y2D5 859 aa26.02■■□□□ 1.76
SMARCD2-201ENST00000225742 LAMA4Q16363 1823 aa26.01■■□□□ 1.75
SMARCD2-201ENST00000225742 CEP126Q9P2H0 1117 aa26.01■■□□□ 1.75
SMARCD2-201ENST00000225742 TOGARAM1Q9Y4F4 1720 aa26■■□□□ 1.75
SMARCD2-201ENST00000225742 PFKFB2O60825 505 aa26■■□□□ 1.75
SMARCD2-201ENST00000225742 TIMM10P62072 90 aa26■■□□□ 1.75
SMARCD2-201ENST00000225742 ZSCAN16Q9H4T2 348 aaPredicted RBP26■■□□□ 1.75
SMARCD2-201ENST00000225742 TMOD3Q9NYL9 352 aa26■■□□□ 1.75
SMARCD2-201ENST00000225742 ABCC12Q96J65 1359 aa26■■□□□ 1.75
SMARCD2-201ENST00000225742 A0A1B0GUL7 405 aa26■■□□□ 1.75
SMARCD2-201ENST00000225742 PTMAP06454 111 aaKnown RBP26■■□□□ 1.75
SMARCD2-201ENST00000225742 HSP90B1P14625 803 aaKnown RBP26■■□□□ 1.75
SMARCD2-201ENST00000225742 LRRC24Q50LG9 513 aa26■■□□□ 1.75
SMARCD2-201ENST00000225742 SMARCC2Q8TAQ2 1214 aa26■■□□□ 1.75
SMARCD2-201ENST00000225742 PCCAP05165 728 aaPredicted RBP25.99■■□□□ 1.75
SMARCD2-201ENST00000225742 EVA1CP58658 441 aa25.99■■□□□ 1.75
SMARCD2-201ENST00000225742 STK3Q13188 491 aa25.99■■□□□ 1.75
SMARCD2-201ENST00000225742 CCDC57Q2TAC2 916 aa25.99■■□□□ 1.75
SMARCD2-201ENST00000225742 AGXT2Q9BYV1 514 aa25.99■■□□□ 1.75
SMARCD2-201ENST00000225742 KIF3AQ9Y496 699 aa25.99■■□□□ 1.75
SMARCD2-201ENST00000225742 CCDC192P0DO97 292 aa25.98■■□□□ 1.75
SMARCD2-201ENST00000225742 HCLS1P14317 486 aaPredicted RBP25.98■■□□□ 1.75
SMARCD2-201ENST00000225742 HSPA2P54652 639 aa25.98■■□□□ 1.75
SMARCD2-201ENST00000225742 EXOSC10Q01780 885 aaKnown RBP25.98■■□□□ 1.75
SMARCD2-201ENST00000225742 KIF6Q6ZMV9 814 aa25.98■■□□□ 1.75
SMARCD2-201ENST00000225742 FERMT3Q86UX7 667 aa25.98■■□□□ 1.75
SMARCD2-201ENST00000225742 SPATA32Q96LK8 384 aa25.98■■□□□ 1.75
SMARCD2-201ENST00000225742 ZFYP08048 801 aaPredicted RBP25.97■■□□□ 1.75
SMARCD2-201ENST00000225742 HMGN5P82970 282 aaKnown RBP25.97■■□□□ 1.75
SMARCD2-201ENST00000225742 CCDC158Q5M9N0 1113 aa25.97■■□□□ 1.75
SMARCD2-201ENST00000225742 GIMAP6Q6P9H5 292 aa25.97■■□□□ 1.75
SMARCD2-201ENST00000225742 STOX1Q6ZVD7 989 aa25.97■■□□□ 1.75
SMARCD2-201ENST00000225742 KDM4AO75164 1064 aa25.96■■□□□ 1.75
SMARCD2-201ENST00000225742 FGD1P98174 961 aa25.96■■□□□ 1.75
SMARCD2-201ENST00000225742 ZNF594Q96JF6 807 aaPredicted RBP25.96■■□□□ 1.75
SMARCD2-201ENST00000225742 DDX19AQ9NUU7 478 aaKnown RBP25.96■■□□□ 1.75
SMARCD2-201ENST00000225742 GOLGA6L4A6NEF3 574 aa25.95■■□□□ 1.75
SMARCD2-201ENST00000225742 HSPD1P10809 573 aaKnown RBP25.95■■□□□ 1.75
SMARCD2-201ENST00000225742 RESTQ13127 1097 aa25.95■■□□□ 1.75
SMARCD2-201ENST00000225742 NAA16Q6N069 864 aaPredicted RBP25.95■■□□□ 1.75
SMARCD2-201ENST00000225742 FBXL16Q8N461 479 aa25.95■■□□□ 1.75
SMARCD2-201ENST00000225742 LEO1Q8WVC0 666 aaPredicted RBP25.95■■□□□ 1.75
SMARCD2-201ENST00000225742 BRF1Q92994 677 aa25.95■■□□□ 1.75
SMARCD2-201ENST00000225742 NUP62CLQ9H1M0 184 aa25.95■■□□□ 1.75
SMARCD2-201ENST00000225742 MAST3O60307 1309 aa25.95■■□□□ 1.74
SMARCD2-201ENST00000225742 CHGBP05060 677 aa25.95■■□□□ 1.74
SMARCD2-201ENST00000225742 CSF1RP07333 972 aa25.95■■□□□ 1.74
SMARCD2-201ENST00000225742 MAP3K11Q16584 847 aa25.95■■□□□ 1.74
SMARCD2-201ENST00000225742 CTNNA3Q9UI47 895 aa25.95■■□□□ 1.74
SMARCD2-201ENST00000225742 NHSL1Q5SYE7 1610 aa25.94■■□□□ 1.74
SMARCD2-201ENST00000225742 CDHR2Q9BYE9 1310 aa25.94■■□□□ 1.74
SMARCD2-201ENST00000225742 H3BQV1 296 aa25.94■■□□□ 1.74
SMARCD2-201ENST00000225742 IFFO2Q5TF58 517 aa25.94■■□□□ 1.74
SMARCD2-201ENST00000225742 ZBTB38Q8NAP3 1195 aaPredicted RBP25.94■■□□□ 1.74
SMARCD2-201ENST00000225742 STRN4Q9NRL3 753 aa25.94■■□□□ 1.74
SMARCD2-201ENST00000225742 CFAP45Q9UL16 551 aa25.94■■□□□ 1.74
SMARCD2-201ENST00000225742 STRCQ7RTU9 1775 aa25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 JAK2O60674 1132 aa25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 DTNBO60941 627 aa25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 ADCY5O95622 1261 aa25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 STARD3NLO95772 234 aa25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 SCRN1Q12765 414 aa25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 PUS3Q9BZE2 481 aaKnown RBP25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 USP25Q9UHP3 1055 aa25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 CCDC9Q9Y3X0 531 aaKnown RBP25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 E7EWF7 191 aa25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 TTC39AQ5SRH9 613 aa25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 ZNF274Q96GC6 653 aaPredicted RBP25.93■■□□□ 1.74
SMARCD2-201ENST00000225742 HSP90AB3PQ58FF7 597 aa25.92■■□□□ 1.74
SMARCD2-201ENST00000225742 ATL3Q6DD88 541 aa25.92■■□□□ 1.74
SMARCD2-201ENST00000225742 GORABQ5T7V8 394 aa25.91■■□□□ 1.74
SMARCD2-201ENST00000225742 NSUN7Q8NE18 718 aaKnown RBP25.91■■□□□ 1.74
SMARCD2-201ENST00000225742 TPM3P06753 285 aa25.91■■□□□ 1.74
SMARCD2-201ENST00000225742 TPRNQ4KMQ1 711 aa25.91■■□□□ 1.74
SMARCD2-201ENST00000225742 FAM173BQ6P4H8 233 aa25.91■■□□□ 1.74
SMARCD2-201ENST00000225742 RBM43Q6ZSC3 357 aaKnown RBP25.91■■□□□ 1.74
SMARCD2-201ENST00000225742 MYH15Q9Y2K3 1946 aa25.9■■□□□ 1.74
SMARCD2-201ENST00000225742 MAP3K15Q6ZN16 1313 aa25.9■■□□□ 1.74
SMARCD2-201ENST00000225742 LIG1P18858 919 aa25.9■■□□□ 1.74
SMARCD2-201ENST00000225742 KIAA2012Q0VF49 1180 aa25.9■■□□□ 1.74
SMARCD2-201ENST00000225742 IFIT5Q13325 482 aaKnown RBP25.9■■□□□ 1.74
SMARCD2-201ENST00000225742 XAGE2Q96GT9 111 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms