RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 TMX1Q9H3N1 280 aa16.55■□□□□ 0.24
SHPK-201ENST00000225519 USP42Q9H9J4 1324 aaKnown RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 GIGYF1O75420 1035 aaPredicted RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 ISM2Q6H9L7 571 aa16.54■□□□□ 0.24
SHPK-201ENST00000225519 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 PSDA5PKW4 1024 aaPredicted RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 LMOD1P29536 600 aaPredicted RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 MRPS27Q92552 414 aaKnown RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 CWC15Q9P013 229 aaKnown RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 ERBB3P21860 1342 aa16.54■□□□□ 0.24
SHPK-201ENST00000225519 OAS2P29728 719 aaKnown RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 EVCP57679 992 aa16.54■□□□□ 0.24
SHPK-201ENST00000225519 ZNF589Q86UQ0 364 aaPredicted RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 OSBPL5Q9H0X9 879 aaPredicted RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 ZCCHC17Q9NP64 241 aaKnown RBP16.54■□□□□ 0.24
SHPK-201ENST00000225519 CCDC191Q8NCU4 936 aa16.53■□□□□ 0.24
SHPK-201ENST00000225519 ZFP91Q96JP5 570 aaPredicted RBP16.53■□□□□ 0.24
SHPK-201ENST00000225519 ORC3Q9UBD5 711 aaPredicted RBP16.53■□□□□ 0.24
SHPK-201ENST00000225519 RCOR1Q9UKL0 485 aa16.53■□□□□ 0.24
SHPK-201ENST00000225519 SERPINC1P01008 464 aa16.53■□□□□ 0.24
SHPK-201ENST00000225519 C10orf67Q8IYJ2 551 aa16.53■□□□□ 0.24
SHPK-201ENST00000225519 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
SHPK-201ENST00000225519 AK7Q96M32 723 aa16.53■□□□□ 0.24
SHPK-201ENST00000225519 TPM1P09493 284 aa16.53■□□□□ 0.24
SHPK-201ENST00000225519 ARMCX5Q6P1M9 558 aa16.53■□□□□ 0.24
SHPK-201ENST00000225519 EDC3Q96F86 508 aaKnown RBP16.53■□□□□ 0.24
SHPK-201ENST00000225519 FLT4P35916 1363 aa16.52■□□□□ 0.24
SHPK-201ENST00000225519 FEZ2Q9UHY8 353 aaPredicted RBP16.52■□□□□ 0.24
SHPK-201ENST00000225519 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.24
SHPK-201ENST00000225519 METP08581 1390 aa16.52■□□□□ 0.24
SHPK-201ENST00000225519 TUBB4AP04350 444 aa16.52■□□□□ 0.24
SHPK-201ENST00000225519 LMAN1P49257 510 aa16.52■□□□□ 0.24
SHPK-201ENST00000225519 TEFQ10587 303 aa16.52■□□□□ 0.24
SHPK-201ENST00000225519 DHX8Q14562 1220 aaKnown RBP16.52■□□□□ 0.24
SHPK-201ENST00000225519 DPCR1Q3MIW9 517 aa16.52■□□□□ 0.24
SHPK-201ENST00000225519 USHBP1Q8N6Y0 703 aa16.52■□□□□ 0.24
SHPK-201ENST00000225519 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.23
SHPK-201ENST00000225519 TULP2O00295 520 aa16.52■□□□□ 0.23
SHPK-201ENST00000225519 MAP3K2Q9Y2U5 619 aa16.52■□□□□ 0.23
SHPK-201ENST00000225519 TUBGCP6Q96RT7 1819 aa16.52■□□□□ 0.23
SHPK-201ENST00000225519 SLC3A2P08195 630 aaKnown RBP16.51■□□□□ 0.23
SHPK-201ENST00000225519 CFAP100Q494V2 611 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 ZBTB9Q96C00 473 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 SRRTQ9BXP5 876 aaKnown RBP16.51■□□□□ 0.23
SHPK-201ENST00000225519 EPC1Q9H2F5 836 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 RASSF4Q9H2L5 321 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
SHPK-201ENST00000225519 ST5P78524 1137 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 CWF19L2Q2TBE0 894 aaKnown RBP16.51■□□□□ 0.23
SHPK-201ENST00000225519 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
SHPK-201ENST00000225519 NLRP6P59044 892 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 SCRN1Q12765 414 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 ZSCAN26Q16670 478 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 NBPF11Q86T75 865 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 SMARCE1Q969G3 411 aa16.51■□□□□ 0.23
SHPK-201ENST00000225519 SMC1AQ14683 1233 aaKnown RBP16.5■□□□□ 0.23
SHPK-201ENST00000225519 ADGRL3Q9HAR2 1447 aa16.5■□□□□ 0.23
SHPK-201ENST00000225519 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
SHPK-201ENST00000225519 CCDC129Q6ZRS4 1044 aa16.5■□□□□ 0.23
SHPK-201ENST00000225519 PDILTQ8N807 584 aa16.5■□□□□ 0.23
SHPK-201ENST00000225519 ARFGAP3Q9NP61 516 aa16.5■□□□□ 0.23
SHPK-201ENST00000225519 RSPH14Q9UHP6 348 aa16.5■□□□□ 0.23
SHPK-201ENST00000225519 SLC20A2Q08357 652 aa16.5■□□□□ 0.23
SHPK-201ENST00000225519 APOBRQ0VD83 1088 aa16.5■□□□□ 0.23
SHPK-201ENST00000225519 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
SHPK-201ENST00000225519 TAF5LO75529 589 aa16.49■□□□□ 0.23
SHPK-201ENST00000225519 GNG11P61952 73 aa16.49■□□□□ 0.23
SHPK-201ENST00000225519 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
SHPK-201ENST00000225519 NAA16Q6N069 864 aaPredicted RBP16.49■□□□□ 0.23
SHPK-201ENST00000225519 CERS3Q8IU89 383 aa16.49■□□□□ 0.23
SHPK-201ENST00000225519 KIAA1468Q9P260 1216 aa16.49■□□□□ 0.23
SHPK-201ENST00000225519 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
SHPK-201ENST00000225519 IGSF1Q8N6C5 1336 aa16.49■□□□□ 0.23
SHPK-201ENST00000225519 FANCCQ00597 558 aa16.49■□□□□ 0.23
SHPK-201ENST00000225519 LMOD2Q6P5Q4 547 aa16.49■□□□□ 0.23
SHPK-201ENST00000225519 ZSCAN12O43309 604 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 POLR3DP05423 398 aaPredicted RBP16.48■□□□□ 0.23
SHPK-201ENST00000225519 CASQ1P31415 396 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 PCDHA7Q9UN72 937 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 NDUFB9Q9Y6M9 179 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 PXDNLA1KZ92 1463 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 EFCAB8A8MWE9 144 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 HDGFP51858 240 aaKnown RBP16.48■□□□□ 0.23
SHPK-201ENST00000225519 UBASH3AP57075 661 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 EID1Q9Y6B2 187 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 SBNO1A3KN83 1393 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 GYS2P54840 703 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 KLHDC4Q8TBB5 520 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 SEC62Q99442 399 aaKnown RBP16.48■□□□□ 0.23
SHPK-201ENST00000225519 ALDH8A1Q9H2A2 487 aaPredicted RBP16.48■□□□□ 0.23
SHPK-201ENST00000225519 ZSWIM4Q9H7M6 989 aa16.48■□□□□ 0.23
SHPK-201ENST00000225519 PHLPP2Q6ZVD8 1323 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 TOP1P11387 765 aaKnown RBP16.47■□□□□ 0.23
SHPK-201ENST00000225519 NDUFA8P51970 172 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 SASH1O94885 1247 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 LEKR1Q6ZMV7 388 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 NSUN7Q8NE18 718 aaKnown RBP16.47■□□□□ 0.23
SHPK-201ENST00000225519 KCND1Q9NSA2 647 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms