RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 NBPF5PQ86XG9 351 aaPredicted RBP21.99■■□□□ 1.11
VIM-201ENST00000224237 VGLL2Q8N8G2 317 aa21.99■■□□□ 1.11
VIM-201ENST00000224237 MPHOSPH8Q99549 860 aa21.99■■□□□ 1.11
VIM-201ENST00000224237 FSD1Q9BTV5 496 aa21.99■■□□□ 1.11
VIM-201ENST00000224237 CASZ1Q86V15 1759 aa21.99■■□□□ 1.11
VIM-201ENST00000224237 COL4A1P02462 1669 aa21.99■■□□□ 1.11
VIM-201ENST00000224237 RFX7Q2KHR2 1363 aa21.99■■□□□ 1.11
VIM-201ENST00000224237 SF3B3Q15393 1217 aaKnown RBP21.98■■□□□ 1.11
VIM-201ENST00000224237 ATP2B3Q16720 1220 aa21.98■■□□□ 1.11
VIM-201ENST00000224237 CWC27Q6UX04 472 aaKnown RBP21.98■■□□□ 1.11
VIM-201ENST00000224237 TPTE2Q6XPS3 522 aa21.98■■□□□ 1.11
VIM-201ENST00000224237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.98■■□□□ 1.11
VIM-201ENST00000224237 PDE8BO95263 885 aa21.98■■□□□ 1.11
VIM-201ENST00000224237 MCCP23508 829 aa21.98■■□□□ 1.11
VIM-201ENST00000224237 IGHMBP2P38935 993 aaKnown RBP21.98■■□□□ 1.11
VIM-201ENST00000224237 NFIXQ14938 502 aa21.98■■□□□ 1.11
VIM-201ENST00000224237 CCDC158Q5M9N0 1113 aa21.98■■□□□ 1.11
VIM-201ENST00000224237 XAGE2Q96GT9 111 aa21.98■■□□□ 1.11
VIM-201ENST00000224237 TBC1D2Q9BYX2 928 aa21.98■■□□□ 1.11
VIM-201ENST00000224237 IL25Q9H293 177 aa21.98■■□□□ 1.11
VIM-201ENST00000224237 CARMIL3Q8ND23 1372 aa21.97■■□□□ 1.11
VIM-201ENST00000224237 GYS1P13807 737 aa21.97■■□□□ 1.11
VIM-201ENST00000224237 CDC5LQ99459 802 aaKnown RBP21.97■■□□□ 1.11
VIM-201ENST00000224237 SPEF2Q9C093 1822 aa21.97■■□□□ 1.11
VIM-201ENST00000224237 GORABQ5T7V8 394 aa21.96■■□□□ 1.11
VIM-201ENST00000224237 ILDR1Q86SU0 546 aaPredicted RBP21.96■■□□□ 1.11
VIM-201ENST00000224237 DNAJC2Q99543 621 aaKnown RBP21.96■■□□□ 1.11
VIM-201ENST00000224237 RAD50Q92878 1312 aa21.96■■□□□ 1.11
VIM-201ENST00000224237 SNX21Q969T3 373 aa21.96■■□□□ 1.11
VIM-201ENST00000224237 IFIT1P09914 478 aaKnown RBP21.95■■□□□ 1.1
VIM-201ENST00000224237 RABEP1Q15276 862 aa21.95■■□□□ 1.1
VIM-201ENST00000224237 TICAM2Q86XR7 235 aa21.95■■□□□ 1.1
VIM-201ENST00000224237 HSCBQ8IWL3 235 aa21.95■■□□□ 1.1
VIM-201ENST00000224237 AKT1S1Q96B36 256 aa21.95■■□□□ 1.1
VIM-201ENST00000224237 TFCP2L1Q9NZI6 479 aa21.95■■□□□ 1.1
VIM-201ENST00000224237 ADORA1P30542 326 aa21.94■■□□□ 1.1
VIM-201ENST00000224237 PUM3Q15397 648 aaKnown RBP21.94■■□□□ 1.1
VIM-201ENST00000224237 TTC39AQ5SRH9 613 aa21.94■■□□□ 1.1
VIM-201ENST00000224237 KIAA1211Q6ZU35 1233 aa21.94■■□□□ 1.1
VIM-201ENST00000224237 NLRP3Q96P20 1036 aa21.94■■□□□ 1.1
VIM-201ENST00000224237 ARAP2Q8WZ64 1704 aa21.94■■□□□ 1.1
VIM-201ENST00000224237 EDC3Q96F86 508 aaKnown RBP21.94■■□□□ 1.1
VIM-201ENST00000224237 PAG1Q9NWQ8 432 aa21.94■■□□□ 1.1
VIM-201ENST00000224237 TAF1P21675 1872 aa21.94■■□□□ 1.1
VIM-201ENST00000224237 RGPD3A6NKT7 1758 aaPredicted RBP21.93■■□□□ 1.1
VIM-201ENST00000224237 RGPD4Q7Z3J3 1758 aa21.93■■□□□ 1.1
VIM-201ENST00000224237 ANAPC15P60006 121 aa21.93■■□□□ 1.1
VIM-201ENST00000224237 KBTBD3Q8NAB2 608 aa21.93■■□□□ 1.1
VIM-201ENST00000224237 NDUFB9Q9Y6M9 179 aa21.93■■□□□ 1.1
VIM-201ENST00000224237 TNRC6CQ9HCJ0 1690 aaKnown RBP21.93■■□□□ 1.1
VIM-201ENST00000224237 NMIQ13287 307 aaPredicted RBP21.92■■□□□ 1.1
VIM-201ENST00000224237 LPIN2Q92539 896 aa21.92■■□□□ 1.1
VIM-201ENST00000224237 LSG1Q9H089 658 aaKnown RBP21.92■■□□□ 1.1
VIM-201ENST00000224237 SNRKQ9NRH2 765 aa21.92■■□□□ 1.1
VIM-201ENST00000224237 NPHP1O15259 732 aa21.92■■□□□ 1.1
VIM-201ENST00000224237 DDX46Q7L014 1031 aaKnown RBP21.92■■□□□ 1.1
VIM-201ENST00000224237 ANKRD18AQ8IVF6 992 aa21.92■■□□□ 1.1
VIM-201ENST00000224237 HELBQ8NG08 1087 aaPredicted RBP21.92■■□□□ 1.1
VIM-201ENST00000224237 FGFR2P21802 821 aa21.91■■□□□ 1.1
VIM-201ENST00000224237 EN1Q05925 392 aaPredicted RBP21.91■■□□□ 1.1
VIM-201ENST00000224237 EZH2Q15910 746 aaKnown RBP21.91■■□□□ 1.1
VIM-201ENST00000224237 FAM227BQ96M60 508 aa21.91■■□□□ 1.1
VIM-201ENST00000224237 GOLIM4O00461 696 aa21.9■■□□□ 1.1
VIM-201ENST00000224237 COL23A1Q86Y22 540 aaPredicted RBP21.9■■□□□ 1.1
VIM-201ENST00000224237 ZNF512BQ96KM6 892 aaPredicted RBP21.9■■□□□ 1.1
VIM-201ENST00000224237 HSPA4P34932 840 aa21.9■■□□□ 1.1
VIM-201ENST00000224237 CNBD1Q8NA66 436 aa21.9■■□□□ 1.1
VIM-201ENST00000224237 A0A0D9SFI3 127 aa21.89■■□□□ 1.09
VIM-201ENST00000224237 SLC5A1P13866 664 aa21.89■■□□□ 1.09
VIM-201ENST00000224237 IL17RAQ96F46 866 aa21.89■■□□□ 1.09
VIM-201ENST00000224237 BSDC1Q9NW68 430 aaPredicted RBP21.89■■□□□ 1.09
VIM-201ENST00000224237 MED23Q9ULK4 1368 aa21.89■■□□□ 1.09
VIM-201ENST00000224237 SNAP23O00161 211 aa21.88■■□□□ 1.09
VIM-201ENST00000224237 TM4SF1P30408 202 aa21.88■■□□□ 1.09
VIM-201ENST00000224237 CHRNDQ07001 517 aa21.88■■□□□ 1.09
VIM-201ENST00000224237 DDR1Q08345 913 aa21.88■■□□□ 1.09
VIM-201ENST00000224237 PRR5LQ6MZQ0 368 aa21.88■■□□□ 1.09
VIM-201ENST00000224237 CAMKK2Q96RR4 588 aa21.88■■□□□ 1.09
VIM-201ENST00000224237 ANO8Q9HCE9 1232 aaPredicted RBP21.88■■□□□ 1.09
VIM-201ENST00000224237 CCDC171Q6TFL3 1326 aa21.87■■□□□ 1.09
VIM-201ENST00000224237 TAF5LO75529 589 aa21.87■■□□□ 1.09
VIM-201ENST00000224237 FKBP4Q02790 459 aaKnown RBP eCLIP21.87■■□□□ 1.09
VIM-201ENST00000224237 LRRFIP1Q32MZ4 808 aaKnown RBP21.87■■□□□ 1.09
VIM-201ENST00000224237 A0A1B0GUL6 1792 aa21.87■■□□□ 1.09
VIM-201ENST00000224237 CELF1Q92879 486 aaKnown RBP21.86■■□□□ 1.09
VIM-201ENST00000224237 PALD1Q9ULE6 856 aa21.86■■□□□ 1.09
VIM-201ENST00000224237 PNPLA7Q6ZV29 1317 aa21.86■■□□□ 1.09
VIM-201ENST00000224237 ST18O60284 1047 aa21.86■■□□□ 1.09
VIM-201ENST00000224237 SERPINB2P05120 415 aa21.86■■□□□ 1.09
VIM-201ENST00000224237 UQCRFS1P1P0C7P4 283 aa21.86■■□□□ 1.09
VIM-201ENST00000224237 ARID4AP29374 1257 aaPredicted RBP21.86■■□□□ 1.09
VIM-201ENST00000224237 CCDC102BQ68D86 513 aa21.86■■□□□ 1.09
VIM-201ENST00000224237 SCARF1Q14162 830 aa21.85■■□□□ 1.09
VIM-201ENST00000224237 FLAD1Q8NFF5 587 aa21.85■■□□□ 1.09
VIM-201ENST00000224237 AKAP11Q9UKA4 1901 aa21.84■■□□□ 1.09
VIM-201ENST00000224237 K7ELQ4 463 aaPredicted RBP21.84■■□□□ 1.09
VIM-201ENST00000224237 POLRMTO00411 1230 aaKnown RBP21.84■■□□□ 1.09
VIM-201ENST00000224237 CD2BP2O95400 341 aaKnown RBP21.84■■□□□ 1.09
VIM-201ENST00000224237 MCAMP43121 646 aa21.84■■□□□ 1.09
VIM-201ENST00000224237 PTH1RQ03431 593 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms