RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 TFCP2Q12800 502 aa17.61■□□□□ 0.41
SRRD-201ENST00000215917 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
SRRD-201ENST00000215917 A0A0D9SFI3 127 aa17.61■□□□□ 0.41
SRRD-201ENST00000215917 AOX1Q06278 1338 aa17.61■□□□□ 0.41
SRRD-201ENST00000215917 ISM2Q6H9L7 571 aa17.61■□□□□ 0.41
SRRD-201ENST00000215917 LRP10Q7Z4F1 713 aa17.61■□□□□ 0.41
SRRD-201ENST00000215917 TTC41PQ6P2S7 1318 aa17.61■□□□□ 0.41
SRRD-201ENST00000215917 NUTM2BA6NNL0 878 aaPredicted RBP17.61■□□□□ 0.41
SRRD-201ENST00000215917 NUTM2EB1AL46 878 aaPredicted RBP17.61■□□□□ 0.41
SRRD-201ENST00000215917 MTX1Q13505 466 aa17.61■□□□□ 0.41
SRRD-201ENST00000215917 CCDC129Q6ZRS4 1044 aa17.61■□□□□ 0.41
SRRD-201ENST00000215917 CCDC186Q7Z3E2 898 aa17.61■□□□□ 0.41
SRRD-201ENST00000215917 NUTM2AQ8IVF1 878 aaPredicted RBP17.61■□□□□ 0.41
SRRD-201ENST00000215917 STRCQ7RTU9 1775 aa17.6■□□□□ 0.41
SRRD-201ENST00000215917 LMBR1LQ6UX01 489 aa17.6■□□□□ 0.41
SRRD-201ENST00000215917 NUP62CLQ9H1M0 184 aa17.6■□□□□ 0.41
SRRD-201ENST00000215917 XIRP1Q702N8 1843 aaKnown RBP17.6■□□□□ 0.41
SRRD-201ENST00000215917 GJB2P29033 226 aa17.6■□□□□ 0.41
SRRD-201ENST00000215917 COL9A3Q14050 684 aaPredicted RBP17.6■□□□□ 0.41
SRRD-201ENST00000215917 LRRC2Q9BYS8 371 aa17.6■□□□□ 0.41
SRRD-201ENST00000215917 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
SRRD-201ENST00000215917 SYT1P21579 422 aa17.59■□□□□ 0.41
SRRD-201ENST00000215917 CUL4AQ13619 759 aa17.59■□□□□ 0.41
SRRD-201ENST00000215917 CCDC66A2RUB6 948 aa17.59■□□□□ 0.41
SRRD-201ENST00000215917 SLFNL1Q499Z3 407 aa17.59■□□□□ 0.41
SRRD-201ENST00000215917 GOLGA6L1Q8N7Z2 621 aa17.59■□□□□ 0.41
SRRD-201ENST00000215917 PIP4K2BP78356 416 aa17.59■□□□□ 0.41
SRRD-201ENST00000215917 TEX35Q5T0J7 233 aa17.59■□□□□ 0.41
SRRD-201ENST00000215917 STX6O43752 255 aa17.58■□□□□ 0.41
SRRD-201ENST00000215917 ZSWIM4Q9H7M6 989 aa17.58■□□□□ 0.41
SRRD-201ENST00000215917 NOL7Q9UMY1 257 aaKnown RBP17.58■□□□□ 0.41
SRRD-201ENST00000215917 CREB3L3Q68CJ9 461 aa17.58■□□□□ 0.4
SRRD-201ENST00000215917 DNAJC10Q8IXB1 793 aa17.58■□□□□ 0.4
SRRD-201ENST00000215917 PLBD2Q8NHP8 589 aa17.58■□□□□ 0.4
SRRD-201ENST00000215917 SEC62Q99442 399 aaKnown RBP17.58■□□□□ 0.4
SRRD-201ENST00000215917 DBNDD2Q9BQY9 259 aa17.58■□□□□ 0.4
SRRD-201ENST00000215917 TAF6LQ9Y6J9 622 aa17.58■□□□□ 0.4
SRRD-201ENST00000215917 CCDC171Q6TFL3 1326 aa17.58■□□□□ 0.4
SRRD-201ENST00000215917 ERVV-2B6SEH9 535 aa17.58■□□□□ 0.4
SRRD-201ENST00000215917 PTGS1P23219 599 aa17.58■□□□□ 0.4
SRRD-201ENST00000215917 INTS4Q96HW7 963 aaKnown RBP17.57■□□□□ 0.4
SRRD-201ENST00000215917 SPATA32Q96LK8 384 aa17.57■□□□□ 0.4
SRRD-201ENST00000215917 PIGBQ92521 554 aa17.57■□□□□ 0.4
SRRD-201ENST00000215917 CCDC94Q9BW85 323 aaPredicted RBP17.57■□□□□ 0.4
SRRD-201ENST00000215917 HSP90AA4PQ58FG1 418 aa17.57■□□□□ 0.4
SRRD-201ENST00000215917 BLOC1S2Q6QNY1 142 aa17.57■□□□□ 0.4
SRRD-201ENST00000215917 ZNF589Q86UQ0 364 aaPredicted RBP17.57■□□□□ 0.4
SRRD-201ENST00000215917 ZNF594Q96JF6 807 aaPredicted RBP17.57■□□□□ 0.4
SRRD-201ENST00000215917 ME1P48163 572 aa17.56■□□□□ 0.4
SRRD-201ENST00000215917 KRT85P78386 507 aa17.56■□□□□ 0.4
SRRD-201ENST00000215917 CLEC17AQ6ZS10 378 aa17.56■□□□□ 0.4
SRRD-201ENST00000215917 C5P01031 1676 aa17.56■□□□□ 0.4
SRRD-201ENST00000215917 BIN1O00499 593 aa17.56■□□□□ 0.4
SRRD-201ENST00000215917 TIMM10P62072 90 aa17.56■□□□□ 0.4
SRRD-201ENST00000215917 CCDC183Q5T5S1 534 aa17.56■□□□□ 0.4
SRRD-201ENST00000215917 DNM1Q05193 864 aaKnown RBP17.56■□□□□ 0.4
SRRD-201ENST00000215917 KINO60870 393 aaKnown RBP17.56■□□□□ 0.4
SRRD-201ENST00000215917 SCN11AQ9UI33 1791 aa17.55■□□□□ 0.4
SRRD-201ENST00000215917 MAP3K11Q16584 847 aa17.55■□□□□ 0.4
SRRD-201ENST00000215917 ZSCAN22P10073 491 aaPredicted RBP17.55■□□□□ 0.4
SRRD-201ENST00000215917 GPTP24298 496 aa17.55■□□□□ 0.4
SRRD-201ENST00000215917 SNRKQ9NRH2 765 aa17.55■□□□□ 0.4
SRRD-201ENST00000215917 DBNLQ9UJU6 430 aaKnown RBP17.55■□□□□ 0.4
SRRD-201ENST00000215917 RNF20Q5VTR2 975 aa17.55■□□□□ 0.4
SRRD-201ENST00000215917 UTYO14607 1347 aa17.55■□□□□ 0.4
SRRD-201ENST00000215917 ZNF445P59923 1031 aa17.54■□□□□ 0.4
SRRD-201ENST00000215917 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
SRRD-201ENST00000215917 PTPN14Q15678 1187 aa17.54■□□□□ 0.4
SRRD-201ENST00000215917 ME3Q16798 604 aa17.54■□□□□ 0.4
SRRD-201ENST00000215917 CLIP2Q9UDT6 1046 aa17.54■□□□□ 0.4
SRRD-201ENST00000215917 GOLIM4O00461 696 aa17.54■□□□□ 0.4
SRRD-201ENST00000215917 CWC25Q9NXE8 425 aaPredicted RBP17.54■□□□□ 0.4
SRRD-201ENST00000215917 RIOK3O14730 519 aaKnown RBP17.53■□□□□ 0.4
SRRD-201ENST00000215917 SLC27A2O14975 620 aa17.53■□□□□ 0.4
SRRD-201ENST00000215917 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
SRRD-201ENST00000215917 LUZP1Q86V48 1076 aa17.53■□□□□ 0.4
SRRD-201ENST00000215917 ACSBG1Q96GR2 724 aa17.53■□□□□ 0.4
SRRD-201ENST00000215917 CPLX1O14810 134 aa17.53■□□□□ 0.4
SRRD-201ENST00000215917 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
SRRD-201ENST00000215917 TTC14Q96N46 770 aa17.53■□□□□ 0.4
SRRD-201ENST00000215917 TNNI3KQ59H18 835 aa17.52■□□□□ 0.4
SRRD-201ENST00000215917 SYNE4Q8N205 404 aa17.52■□□□□ 0.4
SRRD-201ENST00000215917 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
SRRD-201ENST00000215917 FAM89AQ96GI7 184 aa17.52■□□□□ 0.4
SRRD-201ENST00000215917 TPCN1Q9ULQ1 816 aa17.52■□□□□ 0.4
SRRD-201ENST00000215917 FPGT-TNNI3KV9GXZ4 949 aa17.52■□□□□ 0.4
SRRD-201ENST00000215917 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.4
SRRD-201ENST00000215917 EXOC5O00471 708 aa17.51■□□□□ 0.39
SRRD-201ENST00000215917 GPS2Q13227 327 aa17.51■□□□□ 0.39
SRRD-201ENST00000215917 ARGLU1Q9NWB6 273 aaPredicted RBP17.51■□□□□ 0.39
SRRD-201ENST00000215917 HIP1O00291 1037 aa17.51■□□□□ 0.39
SRRD-201ENST00000215917 F13A1P00488 732 aa17.51■□□□□ 0.39
SRRD-201ENST00000215917 RASSF8Q8NHQ8 419 aa17.51■□□□□ 0.39
SRRD-201ENST00000215917 NOC3LQ8WTT2 800 aaKnown RBP17.51■□□□□ 0.39
SRRD-201ENST00000215917 URI1O94763 535 aaPredicted RBP17.51■□□□□ 0.39
SRRD-201ENST00000215917 PSMA5P28066 241 aa17.51■□□□□ 0.39
SRRD-201ENST00000215917 HSP90AB3PQ58FF7 597 aa17.51■□□□□ 0.39
SRRD-201ENST00000215917 ATG3Q9NT62 314 aa17.51■□□□□ 0.39
SRRD-201ENST00000215917 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
SRRD-201ENST00000215917 RAB11FIP4Q86YS3 637 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms