RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Ppp2r5aQ6PD03 486 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Ulbp1Q8HWA3 334 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Matr3Q8K310 846 aaKnown RBP8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Vps18Q8R307 973 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Zkscan3Q91VW9 553 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Col15a1O35206 1367 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Lcmt1A0A0U1RNF2 332 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 ItpripQ3TNL8 555 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Shtn1Q8K2Q9 631 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Pcdhgc5Q91XW9 944 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Itgb1bp2Q9R000 350 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Gm15262A0A140LIQ5 728 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Gm21969J3QJZ1 289 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 SfswapQ3USH5 945 aaKnown RBP8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Ddx42Q810A7 929 aaKnown RBP8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Enox2Q8R0Z2 598 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Iffo2Q8R2V2 512 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Atl3Q91YH5 541 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Ccdc70Q9D9B0 223 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Pibf1E9Q6K3 756 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 GclcP97494 637 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Cwc27Q3TKY6 469 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Trim25Q61510 634 aaKnown RBP8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 1700010I14RikQ7TPG0 532 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Nop9Q8BMC4 636 aaKnown RBP8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 ApobrQ8VBT6 942 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Mrfap1Q9CQL7 125 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Smc1aQ9CU62 1233 aaKnown RBP8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Rlbp1Q9Z275 317 aa8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Eif3aP23116 1344 aaKnown RBP8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Marf1Q8BJ34 1730 aaKnown RBP8.28□□□□□ -1.08
Chm-202ENSMUST00000113388 Eif3j1Q3UGC7 261 aaKnown RBP8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 MyzapQ3UIJ9 466 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Mylk4Q5SUV5 386 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Pde1cQ64338 706 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Eif3j2Q66JS6 263 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Kank4Q6P9J5 1016 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 GakQ99KY4 1305 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Diaph2O70566 1098 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Rb1P13405 921 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Plcb3P51432 1234 aaKnown RBP8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Stk11ipQ3TAA7 1072 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 ThemisQ8BGW0 636 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Eif3cQ8R1B4 911 aaKnown RBP8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 PdcQ9QW08 244 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Elp1Q7TT37 1333 aaKnown RBP8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Pax3P24610 479 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Trak2Q6P9N8 913 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Ccdc181Q80ZU5 509 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Zmat2Q9CPW7 199 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Abca15E9PWH4 1668 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Tpm3-rs7D3Z2H9 248 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 EsrrbQ61539 433 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Trim28Q62318 834 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Nol12Q8BG17 217 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Ccar2Q8VDP4 922 aaKnown RBP8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Spats2lQ91WJ7 558 aaKnown RBP8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Swt1Q9DBQ9 907 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Tpcn1Q9EQJ0 817 aa8.27□□□□□ -1.09
Chm-202ENSMUST00000113388 Tet3Q8BG87 1668 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Parp14Q2EMV9 1817 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Wdr63B2RY71 923 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Smarce1O54941 411 aaKnown RBP8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 G3bp2P97379 482 aaKnown RBP8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Tbc1d32Q3URV1 1296 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Tpp2Q64514 1262 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Pnma3Q8JZW8 466 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 PpanQ91YU8 470 aaKnown RBP8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 XpcP51612 930 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Mcm2P97310 904 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Bbof1Q3V079 533 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 4930572O03RikQ8C5Y0 211 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Gdap1l1Q8VE33 370 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Brms1Q99N20 246 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Snw1Q9CSN1 536 aaKnown RBP8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Gprasp1Q5U4C1 1347 aa8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Ktn1Q61595 1327 aaKnown RBP8.26□□□□□ -1.09
Chm-202ENSMUST00000113388 Gm3409A0A0G2JE67 319 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Als2cr12Q8BVM7 383 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Smc3Q9CW03 1217 aaKnown RBP8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Sept6Q9R1T4 434 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Pet2A2AHY8 747 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Ccdc191J3QQ27 883 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Chpf2Q3UU43 768 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Ccdc57Q6PHN1 1016 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Rassf6Q80UQ2 353 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Chmp7Q8R1T1 451 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Ccdc130Q9D516 385 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Kmt5bQ3U8K7 883 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Ccnl1Q52KE7 532 aaKnown RBP8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Elf1Q60775 612 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Ppp1r37Q8BKR5 712 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 HypkQ9CR41 129 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Kank1E9Q238 1360 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Jakmip2D3YXK0 820 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Ccdc33Q3ULW6 985 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Hspa4Q61316 841 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Ccdc80Q8R2G6 949 aa8.25□□□□□ -1.09
Chm-202ENSMUST00000113388 Bicdl1A0JNT9 577 aa8.24□□□□□ -1.09
Chm-202ENSMUST00000113388 Nat1P50294 290 aa8.24□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms