RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Stx8O88983 236 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Znf365Q8BG89 408 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Igbp1bQ9QZ29 343 aa18.71■□□□□ 0.59
Ubr3-202ENSMUST00000112251 Nfkbil1O88995 381 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Mcur1Q9CXD6 340 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Apol7bB1AQP7 369 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Trim6Q8BGE7 488 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Fsip1Q9D3V5 435 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 AmfrQ9R049 643 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Pabpn1lQ5XFR0 273 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Gimap6Q8K349 305 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Cplx3Q8R1B5 158 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Krt90E9Q1Z0 538 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Cog7Q3UM29 770 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ppp4r4Q8C0Y0 875 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 4930572O03RikQ8C5Y0 211 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Atp2a1Q8R429 994 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Srgap1Q91Z69 1062 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Akap17bA2A3V1 959 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ccnb3Q810T2 1396 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Asic3Q6X1Y6 530 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Frmd4bQ920B0 1035 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Sf3a3Q9D554 501 aaKnown RBP18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Trpc3Q9QZC1 836 aa18.7■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Tut1Q8R3F9 869 aa18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 NinlQ6ZQ12 1394 aa18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 RarsQ9D0I9 660 aaKnown RBP18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ccdc94Q9D6J3 314 aa18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Phldb1Q6PDH0 1371 aaKnown RBP18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 GmnnO88513 206 aa18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Tspyl1O88852 379 aa18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Tmtc4Q8BG19 741 aa18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Atad3Q925I1 591 aa18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Rbm33Q9CXK9 1231 aaKnown RBP18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Exoc3Q6KAR6 755 aa18.69■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Pspc1Q8R326 523 aaKnown RBP18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ube3aO08759 870 aa18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 P4ha1Q60715 534 aa18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ppme1Q8BVQ5 386 aa18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Taf4E9QAP7 1042 aaKnown RBP18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Rabep2Q91WG2 554 aa18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 1700018F24RikB2RW27 314 aa18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Sem1P60897 70 aa18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Uba5Q8VE47 403 aa18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ebag9Q9D0V7 213 aa18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Rfwd2Q9R1A8 733 aaKnown RBP18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Art2aP17981 287 aa18.68■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Svs3aF2Z472 265 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Krt19P19001 403 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Hand2Q61039 217 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Trim17Q7TPM3 477 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Vat1lQ80TB8 417 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Usp33Q8R5K2 909 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Tmem132aQ922P8 1018 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 WrnO09053 1401 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Slc1a4O35874 532 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 SarnpQ9D1J3 210 aaKnown RBP18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 PhexP70669 749 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Clasp2Q8BRT1 1286 aaKnown RBP18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ubac1Q8VDI7 409 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ttc12Q8BW49 704 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Syt1P46096 421 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Sparcl1P70663 650 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Dcaf17Q3TUL7 519 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ubash3aQ3V3E1 624 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Zc4h2Q68FG0 224 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ano10Q8BH79 659 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Spata16Q8C636 571 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Cdk5rap3Q99LM2 503 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Dnm1P39053 867 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Gm4981Q3ULJ8 291 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Nuf2Q99P69 463 aa18.67■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Fam170aQ66LM6 333 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Egfl6Q9JJZ5 550 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Il1rapl2Q9ERS6 686 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 B4galnt4Q766D5 1034 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Basp1Q91XV3 226 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ano6Q6P9J9 911 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Sbno1Q689Z5 1390 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Eef1bO70251 225 aaKnown RBP18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Fen1P39749 378 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Stx12Q9ER00 274 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Speer4dL7N216 212 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Stk38lQ7TSE6 464 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Adcy3Q8VHH7 1145 aa18.66■□□□□ 0.58
Ubr3-202ENSMUST00000112251 GopcQ8BH60 463 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Gm28043E0CXC2 719 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Tpd52Q62393 224 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Bag3Q9JLV1 577 aaKnown RBP18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Apol7eQ3UZ24 369 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ube2hP62257 183 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Stx6Q9JKK1 255 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ccdc160Q3UYG1 323 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Asic1Q6NXK8 526 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ccdc89Q9DA73 370 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Cux2P70298 1426 aa18.65■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ano8Q6PB70 1060 aa18.64■□□□□ 0.58
Ubr3-202ENSMUST00000112251 Ubn1Q4G0F8 1135 aa18.64■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Ddx19aQ61655 478 aaKnown RBP18.64■□□□□ 0.57
Ubr3-202ENSMUST00000112251 Maco1Q7TQE6 664 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms