Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Gm25239-201ENSMUST00000174915 86 ntBASIC43.13■■■■■ 4.49
Atp2a1Q8R429 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.88■■■■□ 3.97
Atp2a1Q8R429 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
Atp2a1Q8R429 Gm15042-201ENSMUST00000120212 883 ntBASIC37.68■■■■□ 3.62
Atp2a1Q8R429 Gm24109-201ENSMUST00000175489 103 ntBASIC37.41■■■■□ 3.58
Atp2a1Q8R429 Gm15045-201ENSMUST00000117359 883 ntBASIC36.87■■■■□ 3.49
Atp2a1Q8R429 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Atp2a1Q8R429 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Atp2a1Q8R429 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.45■■■■□ 3.43
Atp2a1Q8R429 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
Atp2a1Q8R429 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Atp2a1Q8R429 Gm23366-201ENSMUST00000175022 89 ntBASIC36.03■■■■□ 3.36
Atp2a1Q8R429 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Atp2a1Q8R429 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
Atp2a1Q8R429 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Atp2a1Q8R429 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Atp2a1Q8R429 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.84■■■■□ 3.17
Atp2a1Q8R429 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
Atp2a1Q8R429 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.76■■■■□ 3.16
Atp2a1Q8R429 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
Atp2a1Q8R429 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.61■■■■□ 3.13
Atp2a1Q8R429 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Atp2a1Q8R429 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.47■■■■□ 3.11
Atp2a1Q8R429 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Atp2a1Q8R429 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Atp2a1Q8R429 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
Atp2a1Q8R429 Psd-208ENSMUST00000224556 2034 ntBASIC34.22■■■■□ 3.07
Atp2a1Q8R429 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.2■■■■□ 3.07
Atp2a1Q8R429 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Atp2a1Q8R429 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Atp2a1Q8R429 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Atp2a1Q8R429 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.1■■■■□ 3.05
Atp2a1Q8R429 Gm25238-201ENSMUST00000174914 89 ntBASIC34.07■■■■□ 3.04
Atp2a1Q8R429 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.05■■■■□ 3.04
Atp2a1Q8R429 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.98■■■■□ 3.03
Atp2a1Q8R429 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Atp2a1Q8R429 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
Atp2a1Q8R429 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.45■■■□□ 2.95
Atp2a1Q8R429 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.42■■■□□ 2.94
Atp2a1Q8R429 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Atp2a1Q8R429 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.23■■■□□ 2.91
Atp2a1Q8R429 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Atp2a1Q8R429 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.07■■■□□ 2.88
Atp2a1Q8R429 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
Atp2a1Q8R429 Gm27325-201ENSMUST00000175467 74 ntBASIC33.05■■■□□ 2.88
Atp2a1Q8R429 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Atp2a1Q8R429 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Atp2a1Q8R429 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Atp2a1Q8R429 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Atp2a1Q8R429 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Atp2a1Q8R429 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.83■■■□□ 2.85
Atp2a1Q8R429 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.82■■■□□ 2.84
Atp2a1Q8R429 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Atp2a1Q8R429 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Atp2a1Q8R429 Gm25262-201ENSMUST00000174934 133 ntBASIC32.63■■■□□ 2.81
Atp2a1Q8R429 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Atp2a1Q8R429 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.52■■■□□ 2.8
Atp2a1Q8R429 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Atp2a1Q8R429 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.51■■■□□ 2.8
Atp2a1Q8R429 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Atp2a1Q8R429 Rab21-202ENSMUST00000218831 843 ntBASIC32.45■■■□□ 2.79
Atp2a1Q8R429 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.35■■■□□ 2.77
Atp2a1Q8R429 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Atp2a1Q8R429 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Atp2a1Q8R429 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Atp2a1Q8R429 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.22■■■□□ 2.75
Atp2a1Q8R429 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.19■■■□□ 2.74
Atp2a1Q8R429 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Atp2a1Q8R429 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Atp2a1Q8R429 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Atp2a1Q8R429 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.08■■■□□ 2.73
Atp2a1Q8R429 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Atp2a1Q8R429 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.99■■■□□ 2.71
Atp2a1Q8R429 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Atp2a1Q8R429 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Atp2a1Q8R429 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Atp2a1Q8R429 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Atp2a1Q8R429 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.97■■■□□ 2.71
Atp2a1Q8R429 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Atp2a1Q8R429 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Atp2a1Q8R429 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Atp2a1Q8R429 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Atp2a1Q8R429 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Atp2a1Q8R429 Gm26115-201ENSMUST00000175605 87 ntBASIC31.82■■■□□ 2.68
Atp2a1Q8R429 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Atp2a1Q8R429 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.78■■■□□ 2.68
Atp2a1Q8R429 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Atp2a1Q8R429 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Atp2a1Q8R429 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Atp2a1Q8R429 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.69■■■□□ 2.66
Atp2a1Q8R429 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Atp2a1Q8R429 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Atp2a1Q8R429 Gm8109-201ENSMUST00000194076 746 ntBASIC31.62■■■□□ 2.65
Atp2a1Q8R429 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Atp2a1Q8R429 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.62■■■□□ 2.65
Atp2a1Q8R429 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Atp2a1Q8R429 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Atp2a1Q8R429 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.51■■■□□ 2.64
Atp2a1Q8R429 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.49■■■□□ 2.63
Atp2a1Q8R429 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms