RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 ArxO35085 564 aa25.6■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 ZyxQ62523 564 aa25.6■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Sh3bp5Q9Z131 463 aa25.6■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Kcnq2Q9Z351 759 aa25.6■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Znfx1Q8R151 1909 aaKnown RBP25.59■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 MccE9PWI3 1003 aa25.59■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Tmem143Q8VD26 458 aa25.59■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Znf609Q8BZ47 1413 aa25.59■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Speer4dL7N216 212 aa25.58■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Gja5Q01231 358 aa25.58■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Atxn2lQ7TQH0 1049 aaKnown RBP25.58■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Rbm5Q91YE7 815 aaKnown RBP25.58■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Ccne2Q9Z238 404 aa25.58■■□□□ 1.69
Ccdc88a-202ENSMUST00000109477 Cfap70D3YVL2 1141 aa25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Sept1P42209 366 aa25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Ddx46Q569Z5 1032 aaKnown RBP25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Slc39a11Q8BWY7 342 aa25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Top1mtQ8R4U6 593 aa25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Pmfbp1Q9WVQ0 1022 aa25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Myo3bQ1EG27 1305 aa25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 TnksQ6PFX9 1320 aa25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Golim4Q8BXA1 655 aa25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Riok1Q922Q2 567 aa25.57■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Magea1O89006 320 aa25.56■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Magea5O89009 320 aa25.56■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Fam160b2Q80YR2 744 aa25.56■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Q8C6G1 249 aa25.56■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Magea2Q9R2A2 320 aa25.56■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Sh3tc1G3X9F6 1346 aa25.55■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Rad50P70388 1312 aa25.55■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Gm7347D3YYI9 267 aa25.55■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Speer4aF8VPX6 267 aa25.55■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Kiaa0753Q6A000 959 aa25.55■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 1700010I14RikQ7TPG0 532 aa25.55■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Tango6Q8C3S2 1079 aa25.55■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Ppm1fQ8CGA0 452 aa25.55■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 GabrdP22933 449 aa25.54■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Sde2Q8K1J5 448 aaKnown RBP25.54■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Setdb1O88974 1307 aa25.54■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Npc1l1Q6T3U4 1333 aa25.54■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Phrf1A6H619 1682 aa25.54■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Gm4340L7N2C4 268 aa25.54■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 EngaseQ8BX80 734 aa25.54■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Nup98Q6PFD9 1816 aaKnown RBP25.53■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Cyp3a57D3YYZ0 503 aa25.53■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Znf496Q5SXI5 585 aa25.53■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Sptlc3Q8BG54 563 aa25.53■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Mrps27Q8BK72 415 aaKnown RBP25.53■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 IarsQ8BU30 1262 aa25.53■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Mdm2P23804 489 aa25.52■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Nlrp9aQ66X03 949 aa25.52■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Bmp2kQ91Z96 1138 aa25.52■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 PhaxQ9JJT9 385 aaKnown RBP25.52■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Atp6v0a2P15920 856 aa25.51■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Cyp2c67Q569X9 491 aa25.51■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 McamQ8R2Y2 648 aaKnown RBP25.51■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Ppp4r3bQ922R5 820 aa25.51■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Fam84aQ9D650 292 aa25.51■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Adarb2Q9JI20 745 aa25.51■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Lgr5Q9Z1P4 907 aa25.51■■□□□ 1.68
Ccdc88a-202ENSMUST00000109477 Lmnb1P14733 588 aaKnown RBP25.51■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Anapc15P60007 132 aa25.51■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Rps8P62242 208 aaKnown RBP25.51■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Jakmip1Q8BVL9 626 aa25.51■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Naa16Q9DBB4 864 aa25.51■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Popdc2Q9ES82 367 aa25.51■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Mlh1Q9JK91 760 aa25.51■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Myh7Q91Z83 1935 aa25.5■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Zkscan16A2ALW2 728 aa25.5■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 MecomP14404 1042 aa25.5■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Prl3d1P18121 224 aa25.5■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Tgfb2P27090 414 aa25.5■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Rad23bP54728 416 aa25.5■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Ubxn2bQ0KL01 331 aa25.5■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Ltv1Q6NSQ7 470 aaKnown RBP25.5■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Ms4a2P20490 235 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Abtb2Q7TQI7 1024 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 CpvlQ9D3S9 478 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Usp21Q9QZL6 566 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Heg1E9Q7X6 1337 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Magea6O89010 325 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 NpeppsQ11011 920 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Fhdc1Q3ULZ2 1149 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Magea3Q6T340 320 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Tshz3Q8CGV9 1081 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Ube3bQ9ES34 1070 aa25.49■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 IntuQ059U7 942 aa25.48■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Ifit2Q64112 472 aa25.48■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Hirip3Q8BLH7 601 aa25.48■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Ufl1Q8CCJ3 793 aaKnown RBP25.48■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Erc1Q99MI1 1120 aa25.48■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Rbm17Q8JZX4 405 aaKnown RBP25.47■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Map3k15A2AQW0 1331 aa25.47■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Frmpd3A0A140LIW3 1774 aa25.46■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Oas2E9Q9A9 742 aa25.46■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Psd3Q2PFD7 1037 aa25.46■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Nek11Q8C0Q4 628 aa25.46■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Dydc2Q9D3X8 139 aa25.46■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Il15P48346 162 aa25.46■■□□□ 1.67
Ccdc88a-202ENSMUST00000109477 Taf1dQ9D4V4 322 aa25.46■■□□□ 1.67
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms