RNA–Protein interactions for RNA: ENSMUST00000100461.6

Smurf1-202, Transcript of E3 ubiquitin-protein ligase SMURF1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Smurf1, Length 2,725 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1-202ENSMUST00000100461 Nup153E9Q3G8 1462 aaKnown RBP27.32■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Mtmr3Q8K296 1196 aa27.32■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Kcnh5Q920E3 988 aa27.32■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Echdc1Q9D9V3 322 aa27.32■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Rrp1P56183 494 aaKnown RBP27.31■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Ints4Q8CIM8 964 aa27.31■■□□□ 1.96
Smurf1-202ENSMUST00000100461 GnpatP98192 678 aa27.31■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Tmem109Q3UBX0 243 aa27.31■■□□□ 1.96
Smurf1-202ENSMUST00000100461 H2afxP27661 143 aaKnown RBP27.3■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Ppp1r10Q80W00 888 aaKnown RBP27.3■■□□□ 1.96
Smurf1-202ENSMUST00000100461 NmiO35309 314 aa27.3■■□□□ 1.96
Smurf1-202ENSMUST00000100461 XpcP51612 930 aa27.3■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Ddx17Q501J6 650 aaKnown RBP27.3■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Kdm6aO70546 1401 aa27.3■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Ccdc112A0AUP1 442 aa27.29■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Panx2Q6IMP4 677 aa27.29■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Ppp1r37Q8BKR5 712 aa27.29■■□□□ 1.96
Smurf1-202ENSMUST00000100461 4930504O13RikQ8C5Z9 145 aa27.29■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Eif4a1P60843 406 aaKnown RBP27.29■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Gpatch3Q8BIY1 525 aa27.28■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Dnm3Q8BZ98 863 aa27.28■■□□□ 1.96
Smurf1-202ENSMUST00000100461 AW822073A0A0N4SUK1 652 aa27.28■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Anp32eP97822 260 aaKnown RBP27.28■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Dzip1Q8BMD2 852 aa27.28■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Xpo4Q9ESJ0 1151 aa27.28■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Map3k2Q61083 619 aa27.27■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Larp1Q6ZQ58 1072 aaKnown RBP27.27■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Casz1Q9CWL2 1761 aa27.26■■□□□ 1.96
Smurf1-202ENSMUST00000100461 Prr29B1ARI9 187 aa27.26■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Wdr3Q8BHB4 942 aaKnown RBP27.26■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Vps18Q8R307 973 aa27.25■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Irgm2A0A140LIF8 407 aa27.25■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Ccdc102aQ3TMW1 549 aa27.25■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Mei4Q8BRM6 389 aa27.25■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Bicc1Q99MQ1 977 aaKnown RBP27.25■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Actn3O88990 900 aaKnown RBP27.25■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Mcm6P97311 821 aa27.25■■□□□ 1.95
Smurf1-202ENSMUST00000100461 StrbpQ91WM1 672 aaKnown RBP27.25■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Ccer1Q9CQL2 403 aa27.25■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Limch1Q3UH68 1057 aa27.24■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Ccdc34Q3UI66 367 aa27.24■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Btbd11Q6GQW0 1109 aa27.24■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Trak2Q6P9N8 913 aa27.24■■□□□ 1.95
Smurf1-202ENSMUST00000100461 CoblQ5NBX1 1337 aaKnown RBP27.24■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Jarid2Q62315 1234 aa27.24■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Hmg20bQ9Z104 317 aa27.24■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Cdca8Q8BHX3 289 aa27.23■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Bin1O08539 588 aaKnown RBP27.23■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Mns1Q61884 491 aa27.23■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Aox2Q5SGK3 1345 aa27.23■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Cct2P80314 535 aaKnown RBP27.22■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Rassf8Q8CJ96 419 aa27.22■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Farp2Q91VS8 1065 aa27.22■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Tubb6Q922F4 447 aa27.22■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Gm10471E9Q1C7 252 aa27.22■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Arglu1Q3UL36 271 aaKnown RBP27.22■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Luzp1Q8R4U7 1068 aaKnown RBP27.21■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Nid2O88322 1403 aa27.21■■□□□ 1.95
Smurf1-202ENSMUST00000100461 TrdnE9Q9K5 693 aa27.21■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Kcnd1Q03719 651 aa27.21■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Kiaa1524Q8BWY9 907 aa27.21■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Mst1rQ62190 1378 aa27.21■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Dnajc2P54103 621 aaKnown RBP27.2■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Uri1Q3TLD5 531 aa27.2■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Tmem87aQ8BXN9 555 aa27.2■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Rgs12Q8CGE9 1381 aa27.2■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Mrpl44Q9CY73 333 aaKnown RBP27.2■■□□□ 1.95
Smurf1-202ENSMUST00000100461 Dlg5E9Q9R9 1921 aa27.2■■□□□ 1.94
Smurf1-202ENSMUST00000100461 TnrQ8BYI9 1358 aa27.2■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Morc2aQ69ZX6 1030 aa27.2■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Jakmip2D3YXK0 820 aa27.19■■□□□ 1.94
Smurf1-202ENSMUST00000100461 RubcnlQ3TD16 648 aa27.19■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Ccdc155Q80VJ8 648 aa27.19■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Sh3bp5Q9Z131 463 aa27.19■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Nrxn3Q6P9K9 1571 aa27.19■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Unc13bQ9Z1N9 1602 aa27.18■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Col4a3bpQ9EQG9 624 aa27.18■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Tshz2Q68FE9 1030 aa27.18■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Nxf7Q80SZ6 620 aaKnown RBP27.17■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Col15a1O35206 1367 aa27.17■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Ktn1Q61595 1327 aaKnown RBP27.17■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Smarcc2Q6PDG5 1213 aa27.17■■□□□ 1.94
Smurf1-202ENSMUST00000100461 ChmQ9QXG2 665 aa27.17■■□□□ 1.94
Smurf1-202ENSMUST00000100461 EcsitQ9QZH6 435 aa27.17■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Lrriq3Q14DL3 633 aa27.16■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Tpm4Q6IRU2 248 aa27.16■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Lrrfip2Q91WK0 415 aa27.16■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Col1a2Q01149 1372 aa27.16■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Ica1lQ3TY65 431 aa27.16■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Igsf3Q6ZQA6 1194 aa27.16■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Abcc12Q80WJ6 1366 aa27.16■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Hps3Q91VB4 1002 aa27.15■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Fam76aQ922G2 307 aa27.15■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Magi2Q9WVQ1 1275 aa27.15■■□□□ 1.94
Smurf1-202ENSMUST00000100461 PhaxQ9JJT9 385 aaKnown RBP27.15■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Zranb2Q9R020 330 aaKnown RBP27.15■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Ccdc121E9Q6D3 323 aa27.14■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Siglec1Q62230 1695 aa27.14■■□□□ 1.94
Smurf1-202ENSMUST00000100461 Neurod6P48986 337 aa27.14■■□□□ 1.93
Smurf1-202ENSMUST00000100461 Itga6Q61739 1091 aa27.14■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 69.2 ms