RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Ccdc155Q80VJ8 648 aa12.7□□□□□ -0.38
Trim61-201ENSMUST00000078409 Smc1bQ920F6 1248 aa12.7□□□□□ -0.38
Trim61-201ENSMUST00000078409 Tktl2Q9D4D4 627 aa12.7□□□□□ -0.38
Trim61-201ENSMUST00000078409 Ankrd35E9Q9D8 996 aa12.7□□□□□ -0.38
Trim61-201ENSMUST00000078409 Nkx2-3P97334 362 aa12.7□□□□□ -0.38
Trim61-201ENSMUST00000078409 Cep63Q3UPP8 700 aa12.7□□□□□ -0.38
Trim61-201ENSMUST00000078409 Thrap3Q569Z6 951 aaKnown RBP12.7□□□□□ -0.38
Trim61-201ENSMUST00000078409 Dpf1Q9QX66 387 aa12.7□□□□□ -0.38
Trim61-201ENSMUST00000078409 Zfp831A2ADM8 1628 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Atf5O70191 283 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Nap1l1P28656 391 aaKnown RBP12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Nat1P50294 290 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Gucy2cQ3UWA6 1072 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Vil1Q62468 827 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Npdc1Q64322 332 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Cd248Q91V98 765 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Efcab2Q9CQ46 164 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Med4Q9CQA5 270 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Paip2Q9D6V8 124 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 MetP16056 1379 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Znf568E9PYI1 671 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Kif1cO35071 1100 aaKnown RBP12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 SfswapQ3USH5 945 aaKnown RBP12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Sh3gl3Q62421 347 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Zbtb1Q91VL9 713 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Trip6Q9Z1Y4 480 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Syde2E9PUP1 1314 aa12.69□□□□□ -0.38
Trim61-201ENSMUST00000078409 Atp11aP98197 1187 aa12.68□□□□□ -0.38
Trim61-201ENSMUST00000078409 Ccdc85aQ5SP85 500 aa12.68□□□□□ -0.38
Trim61-201ENSMUST00000078409 Mphosph10Q810V0 681 aaKnown RBP12.68□□□□□ -0.38
Trim61-201ENSMUST00000078409 CrebrfQ8CDG5 640 aaKnown RBP12.68□□□□□ -0.38
Trim61-201ENSMUST00000078409 Col26a1Q91VF6 440 aa12.68□□□□□ -0.38
Trim61-201ENSMUST00000078409 TnikP83510 1323 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Zfp597E9Q6S0 419 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 NefhP19246 1090 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Irx1P81068 480 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Gja5Q01231 358 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Gzf1Q4VBD9 706 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Foxd1Q61345 456 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Pdzph1Q8BGR1 1238 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Rps6kc1Q8BLK9 1056 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Slc12a5Q91V14 1138 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Lama4P97927 1816 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Ddx60E9PZQ1 1711 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Zfp213E9QAW0 468 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Pax3P24610 479 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Ptcd1Q8C2E4 695 aaKnown RBP12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Phf20l1Q8CCJ9 1013 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Pcdhgc5Q91XW9 944 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Nsfl1cQ9CZ44 370 aaKnown RBP12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Ftsj3Q9DBE9 838 aaKnown RBP12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Hs6st3Q9QYK4 470 aa12.67□□□□□ -0.38
Trim61-201ENSMUST00000078409 Mrc1Q61830 1456 aa12.66□□□□□ -0.38
Trim61-201ENSMUST00000078409 Mapk8ip3Q9ESN9 1337 aa12.66□□□□□ -0.38
Trim61-201ENSMUST00000078409 Ess2O70279 479 aa12.66□□□□□ -0.38
Trim61-201ENSMUST00000078409 Eif5P59325 429 aaKnown RBP12.66□□□□□ -0.38
Trim61-201ENSMUST00000078409 Nup188Q6ZQH8 1759 aa12.66□□□□□ -0.38
Trim61-201ENSMUST00000078409 Trpm7Q923J1 1863 aa12.66□□□□□ -0.38
Trim61-201ENSMUST00000078409 Ccbe1Q3MI99 408 aa12.65□□□□□ -0.38
Trim61-201ENSMUST00000078409 Zscan10Q3URR7 782 aa12.65□□□□□ -0.38
Trim61-201ENSMUST00000078409 Gnl3lQ6PGG6 577 aaKnown RBP12.65□□□□□ -0.38
Trim61-201ENSMUST00000078409 Tmco4Q91WU4 631 aa12.65□□□□□ -0.38
Trim61-201ENSMUST00000078409 Frmd4bQ920B0 1035 aa12.65□□□□□ -0.38
Trim61-201ENSMUST00000078409 Kif2aP28740 705 aa12.65□□□□□ -0.38
Trim61-201ENSMUST00000078409 Ankib1Q6ZPS6 1085 aa12.65□□□□□ -0.38
Trim61-201ENSMUST00000078409 Micall1Q8BGT6 870 aa12.65□□□□□ -0.38
Trim61-201ENSMUST00000078409 Matr3Q8K310 846 aaKnown RBP12.65□□□□□ -0.38
Trim61-201ENSMUST00000078409 Slc4a9E9PUP3 929 aa12.64□□□□□ -0.39
Trim61-201ENSMUST00000078409 Pacs2Q3V3Q7 862 aa12.64□□□□□ -0.39
Trim61-201ENSMUST00000078409 Sfr1Q8BP27 319 aa12.64□□□□□ -0.39
Trim61-201ENSMUST00000078409 Mylk2Q8VCR8 613 aa12.64□□□□□ -0.39
Trim61-201ENSMUST00000078409 Cdca7Q9D0M2 382 aa12.64□□□□□ -0.39
Trim61-201ENSMUST00000078409 Kif13bA0A286YCV9 1847 aa12.64□□□□□ -0.39
Trim61-201ENSMUST00000078409 Mylk4Q5SUV5 386 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Zkscan4Q5SZT6 480 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Klra4Q60651 263 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Dpf2Q61103 391 aaKnown RBP12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Fam210aQ8BGY7 273 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Eif2b5Q8CHW4 717 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Ssh3Q8K330 649 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Glipr1l2Q9CQ35 332 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Klra1P20937 262 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 GclcP97494 637 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Mcm10Q0VBD2 885 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Mns1Q61884 491 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Soga3Q6NZL0 945 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Trim37Q6PCX9 961 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Tmc1Q8R4P5 757 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Nip7Q9CXK8 180 aaKnown RBP12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Odf2lQ9D478 642 aa12.63□□□□□ -0.39
Trim61-201ENSMUST00000078409 Olfr247E9PVJ7 320 aa12.62□□□□□ -0.39
Trim61-201ENSMUST00000078409 Olfr819K7N727 320 aa12.62□□□□□ -0.39
Trim61-201ENSMUST00000078409 Hsp90ab1P11499 724 aaKnown RBP12.62□□□□□ -0.39
Trim61-201ENSMUST00000078409 PdgfdQ925I7 370 aa12.62□□□□□ -0.39
Trim61-201ENSMUST00000078409 Antxr1Q9CZ52 562 aa12.62□□□□□ -0.39
Trim61-201ENSMUST00000078409 Abcc12Q80WJ6 1366 aa12.62□□□□□ -0.39
Trim61-201ENSMUST00000078409 Strn4P58404 760 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Ralbp1Q62172 648 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 IqcgQ80W32 419 aa12.61□□□□□ -0.39
Trim61-201ENSMUST00000078409 Pnma3Q8JZW8 466 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms