RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Nat3P50296 290 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 AnlnQ8K298 1121 aaKnown RBP10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 HdlbpQ8VDJ3 1268 aaKnown RBP10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Xpo5Q924C1 1204 aaKnown RBP10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Xab2Q9DCD2 855 aaKnown RBP10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Sall2Q9QX96 1004 aa10.23□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Anks6Q6GQX6 883 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Elac1Q8VEB6 362 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Trim33Q99PP7 1142 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ndc80Q9D0F1 642 aaKnown RBP10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Slfn14V9GXG1 899 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Myo6Q64331 1265 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 MyripQ8K3I4 856 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Zyg11aA2BFL2 627 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Lrrcc1Q69ZB0 1026 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ephx4Q6IE26 359 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Fam192aQ91WE2 254 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Palm2Q8BR92 376 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Pcdhb20Q91XZ9 799 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ubxn1Q922Y1 297 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Atp11cQ9QZW0 1129 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Hic1Q9R1Y5 733 aa10.22□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Apol8A2VDH7 339 aaKnown RBP10.21□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Cpb1B2RS76 415 aa10.21□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Kif3aP28741 701 aa10.21□□□□□ -0.77
Clcn3-202ENSMUST00000056508 HarsQ61035 509 aa10.21□□□□□ -0.77
Clcn3-202ENSMUST00000056508 RubcnQ80U62 956 aa10.21□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Nsl1Q8K305 281 aa10.21□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Tor1aip1Q921T2 595 aaKnown RBP10.21□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Ndufb5Q9CQH3 189 aa10.21□□□□□ -0.77
Clcn3-202ENSMUST00000056508 Tsc22d2E9Q7M2 769 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Stmn1P54227 149 aaKnown RBP10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Smad1P70340 465 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 G3bp1P97855 465 aaKnown RBP10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Hand2Q61039 217 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cstf2Q8BIQ5 580 aaKnown RBP10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Gatad2aQ8CHY6 629 aaKnown RBP10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Smc1bQ920F6 1248 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ccdc163A2AGD7 326 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Znf711A2ANX9 761 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cbfa2t2O70374 594 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Phka1P18826 1241 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Pola2P33611 600 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Zbed3Q9D0L1 228 aa10.21□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Znf574Q8BY46 900 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Sorbs3Q9R1Z8 733 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Zfp850J3QPC5 689 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Mcm2P97310 904 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Nsrp1Q5NCR9 542 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Znf653Q6YND2 615 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Znf507Q6ZPY5 941 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Disc1Q811T9 852 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Pphln1Q8K2H1 381 aaKnown RBP10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 2310003L06RikQ9CV82 495 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Fam133bQ9CVI2 245 aaKnown RBP10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 DonsonQ9QXP4 560 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Otud7bB2RUR8 840 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Adra2bP30545 450 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Spg7Q3ULF4 781 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ddx49Q4FZF3 480 aaKnown RBP10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Acbd5Q5XG73 508 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Glt1d1A4FUP9 346 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Gm382B1AXN3 1250 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Angpt1O08538 498 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Stat1P42225 749 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Kcnj5P48545 419 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ice2Q3UZ18 988 aaKnown RBP10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Erc2Q6PH08 957 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cplx4Q80WM3 160 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Mgea5Q9EQQ9 916 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Strn3Q9ERG2 796 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 CluQ06890 448 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Jakmip3Q5DTN8 844 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Arhgap26Q6ZQ82 814 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Lrsam1Q80ZI6 727 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Dis3Q9CSH3 958 aaKnown RBP10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Pde3aQ9Z0X4 1141 aa10.2□□□□□ -0.78
Clcn3-202ENSMUST00000056508 CltaO08585 235 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 F10O88947 481 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Gbp8Q2V6D6 525 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Cyp4a12aQ91WL5 508 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ddx17Q501J6 650 aaKnown RBP10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Mapre1Q61166 268 aaKnown RBP10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Usp7Q6A4J8 1103 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 AdpgkQ8VDL4 496 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 GmfbQ9CQI3 142 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Tdrd12Q9CWU0 1215 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Trim12cD3Z3L3 497 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ttc17E9PVB5 1198 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Aplp1Q03157 653 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Fam71bQ5STT6 665 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Pi16Q9ET66 489 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Elf2Q9JHC9 593 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Tspyl3Q3UYP3 334 aa10.19□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Ifit1bl1D3Z6F0 470 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Casp2P29594 452 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 FerP70451 823 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Pif1Q80SX8 650 aa10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Utp6Q8VCY6 597 aaKnown RBP10.18□□□□□ -0.78
Clcn3-202ENSMUST00000056508 Rsph1Q8VIG3 301 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms