RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Chaf1aQ9QWF0 911 aa15.53■□□□□ 0.08
Vps35-201ENSMUST00000034131 Ppfia3P60469 1194 aa15.53■□□□□ 0.08
Vps35-201ENSMUST00000034131 Map3k13Q1HKZ5 959 aa15.53■□□□□ 0.08
Vps35-201ENSMUST00000034131 Chpf2Q3UU43 768 aa15.53■□□□□ 0.08
Vps35-201ENSMUST00000034131 Dnajc5gQ8C632 165 aa15.53■□□□□ 0.08
Vps35-201ENSMUST00000034131 Magi2Q9WVQ1 1275 aa15.53■□□□□ 0.08
Vps35-201ENSMUST00000034131 Ppp2r3dQ9Z176 491 aa15.53■□□□□ 0.08
Vps35-201ENSMUST00000034131 Adcy9P51830 1353 aa15.52■□□□□ 0.08
Vps35-201ENSMUST00000034131 Mdm2P23804 489 aa15.52■□□□□ 0.08
Vps35-201ENSMUST00000034131 Zap70P43404 618 aa15.52■□□□□ 0.08
Vps35-201ENSMUST00000034131 Ctnna3Q65CL1 895 aa15.52■□□□□ 0.08
Vps35-201ENSMUST00000034131 Fam228bQ497Q6 232 aa15.52■□□□□ 0.08
Vps35-201ENSMUST00000034131 Cgref1Q8R1U2 281 aa15.52■□□□□ 0.08
Vps35-201ENSMUST00000034131 Sh3bp5Q9Z131 463 aa15.52■□□□□ 0.08
Vps35-201ENSMUST00000034131 Stxbp4Q9WV89 557 aa15.52■□□□□ 0.07
Vps35-201ENSMUST00000034131 Ccdc114Q3UX62 658 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Rassf8Q8CJ96 419 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Brms1Q99N20 246 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Mrpl44Q9CY73 333 aaKnown RBP15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Hmg20bQ9Z104 317 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Mroh1E0CZ22 1640 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Pde11aP0C1Q2 933 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Atg3Q9CPX6 314 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Ankrd1Q9CR42 319 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Irgm2A0A140LIF8 407 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Psme1P97371 249 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Q66JV7 365 aa15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Larp1Q6ZQ58 1072 aaKnown RBP15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Pes1Q9EQ61 584 aaKnown RBP15.51■□□□□ 0.07
Vps35-201ENSMUST00000034131 Gli2Q0VGT2 1544 aa15.5■□□□□ 0.07
Vps35-201ENSMUST00000034131 Igsf1Q7TQA1 1317 aa15.5■□□□□ 0.07
Vps35-201ENSMUST00000034131 Fsd2Q8BZ52 692 aa15.5■□□□□ 0.07
Vps35-201ENSMUST00000034131 Brd3Q8K2F0 726 aaKnown RBP15.5■□□□□ 0.07
Vps35-201ENSMUST00000034131 Foxp4Q9DBY0 795 aaKnown RBP15.5■□□□□ 0.07
Vps35-201ENSMUST00000034131 Pa2g4P50580 394 aaKnown RBP15.5■□□□□ 0.07
Vps35-201ENSMUST00000034131 Acbd5Q5XG73 508 aa15.5■□□□□ 0.07
Vps35-201ENSMUST00000034131 Fhod1Q6P9Q4 1197 aa15.5■□□□□ 0.07
Vps35-201ENSMUST00000034131 Bicdl2Q8CHW5 507 aa15.5■□□□□ 0.07
Vps35-201ENSMUST00000034131 Ercc3P49135 783 aa15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Evi5P97366 809 aa15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Def6Q8C2K1 630 aa15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Stk38Q91VJ4 465 aa15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Bag3Q9JLV1 577 aaKnown RBP15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 PzpQ61838 1495 aa15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Adgrb1Q3UHD1 1582 aa15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Mphosph10Q810V0 681 aaKnown RBP15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Ppp2r2cQ8BG02 447 aa15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Diaph1O08808 1255 aa15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Ice2Q3UZ18 988 aaKnown RBP15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Atp1a2Q6PIE5 1020 aa15.49■□□□□ 0.07
Vps35-201ENSMUST00000034131 Jakmip3Q5DTN8 844 aa15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 TxlnaQ6PAM1 554 aaKnown RBP15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Prkag3Q8BGM7 489 aa15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Nat10Q8K224 1024 aaKnown RBP15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Slc26a8Q8R0C3 999 aa15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Tmc2Q8R4P4 888 aa15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Slc1a4O35874 532 aa15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Specc1lQ2KN98 1118 aaKnown RBP15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 PhaxQ9JJT9 385 aaKnown RBP15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Cct2P80314 535 aaKnown RBP15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Erich4Q3UNU4 136 aa15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Ccdc12Q8R344 166 aaKnown RBP15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Sh2b1Q91ZM2 756 aa15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Cbx8Q9QXV1 362 aa15.48■□□□□ 0.07
Vps35-201ENSMUST00000034131 Kif13aQ9EQW7 1749 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Itga6Q61739 1091 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 FancaQ9JL70 1439 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Mdh1P14152 334 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 ItpripQ3TNL8 555 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Klra4Q60651 263 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Cfap100Q80VN0 613 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Srek1Q8BZX4 494 aaKnown RBP15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Nop2Q922K7 793 aaKnown RBP15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Acsbg1Q99PU5 721 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Cfap99A0A140LIX9 648 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Zbtb3Q91X45 518 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Fbxo3Q9DC63 480 aa15.47■□□□□ 0.07
Vps35-201ENSMUST00000034131 Dnajc25A2ALW5 357 aa15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 Atf5O70191 283 aa15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 Exoc8Q6PGF7 716 aa15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 Edc3Q8K2D3 508 aaKnown RBP15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 AceP09470 1312 aa15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 Rsrc2A2RTL5 376 aaKnown RBP15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 Ccdc82Q6PG04 518 aa15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 Cd209bQ8CJ91 325 aa15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 Nek9Q8K1R7 984 aa15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 Topbp1Q6ZQF0 1515 aa15.46■□□□□ 0.07
Vps35-201ENSMUST00000034131 Ccdc191J3QQ27 883 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Tgfb1i1Q62219 461 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Map3k11Q80XI6 850 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 OvosQ3UU35 1456 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Tbc1d2B1AVH7 922 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Kifc2O08672 792 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Nbr1P97432 988 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Cct8l1Q80YT3 562 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Cfap69Q8BH53 942 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Epc1Q8C9X6 813 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Ric8aQ3TIR3 530 aa15.45■□□□□ 0.06
Vps35-201ENSMUST00000034131 Fsd1Q7TPM6 496 aa15.45■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms