RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 CCDC159P0C7I6 412 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 PRR23D2P0DMB1 279 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ABOP16442 354 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 TCEA1P23193 301 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 PAX7P23759 505 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SHC1P29353 583 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 HTR1FP30939 366 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 POLR2IP36954 125 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 CAPZA2P47755 286 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 STARP49675 285 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 P2RY4P51582 365 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SUCLG1P53597 346 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 CLDN20P56880 219 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ERVK-25P63136 954 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 EFNB1P98172 346 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 IL5RAQ01344 420 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 POU3F1Q03052 451 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SRYQ05066 204 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 RASGEF1BQ0VAM2 473 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 KRR1Q13601 381 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 FHL1Q13642 323 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SLC17A1Q14916 467 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 MAD2L1BPQ15013 274 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 PON3Q15166 354 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ACKR1Q16570 336 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ST3GAL2Q16842 350 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 MS4A18Q3C1V0 323 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 NADK2Q4G0N4 442 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 GXYLT1Q4G148 440 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 KLHL22Q53GT1 634 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SLC35D3Q5M8T2 416 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 RBM48Q5RL73 367 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 C6orf141Q5SZD1 244 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 C1QTNF12Q5T7M4 302 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 RIPPLY2Q5TAB7 128 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 LCN1P1Q5VSP4 162 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 NXNL2Q5VZ03 156 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 NSUN5P2Q63ZY6 315 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ABLIM2Q6H8Q1 611 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 TMEM211Q6ICI0 200 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ACSM5Q6NUN0 579 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 GFRALQ6UXV0 394 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 CREB3L2Q70SY1 520 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SLC35D2Q76EJ3 337 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 FCRLAQ7L513 359 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SSX8Q7RTT4 187 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 FAM122BQ7Z309 247 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 P4HA3Q7Z4N8 544 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ABHD12BQ7Z5M8 362 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 DPPA2Q7Z7J5 298 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 MRGPRGQ86SM5 289 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 GPAT4Q86UL3 456 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 CHERPQ8IWX8 916 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 UBQLNLQ8IYU4 475 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 LRRC17Q8N6Y2 441 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 TMEM99Q8N816 258 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 OR9K2Q8NGE7 335 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 OR2T4Q8NH00 348 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 MOSPD2Q8NHP6 518 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 FAM57AQ8TBR7 257 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 TMEM163Q8TC26 289 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 RNF128Q8TEB7 428 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 HDAC2Q92769 488 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 MYDGFQ969H8 173 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ZNF566Q969W8 418 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 MRPL48Q96GC5 212 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SLC25A44Q96H78 314 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 GMPPAQ96IJ6 420 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 CNBD2Q96M20 576 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ERMAPQ96PL5 475 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 RBP7Q96R05 134 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 IL4I1Q96RQ9 567 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 MNTQ99583 582 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SOX7Q9BT81 388 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 WACQ9BTA9 647 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 KATNB1Q9BVA0 655 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 PLA2G12AQ9BZM1 189 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 TP63Q9H3D4 680 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 EGLN3Q9H6Z9 239 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 BCO1Q9HAY6 547 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 MSL2Q9HCI7 577 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 B3GAT2Q9NPZ5 323 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 PLCXD1Q9NUJ7 323 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ASB6Q9NWX5 421 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 HAO2Q9NYQ3 351 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 CNOT2Q9NZN8 540 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 VSX1Q9NZR4 365 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 B3GAT1Q9P2W7 334 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 SPRR3Q9UBC9 169 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 WARS2Q9UGM6 360 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 ZNF346Q9UL40 294 aaKnown RBP3.39□□□□□ -1.87
C11orf54-204ENST00000527003 CAMK2AQ9UQM7 478 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 TPRKBQ9Y3C4 175 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 IER3IP1Q9Y5U9 82 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 CELSR3Q9NYQ7 3312 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 DOCK10Q96BY6 2186 aa3.39□□□□□ -1.87
C11orf54-204ENST00000527003 TLN1Q9Y490 2541 aaKnown RBP3.38□□□□□ -1.87
C11orf54-204ENST00000527003 A0A0A6YYJ9 748 aa3.38□□□□□ -1.87
C11orf54-204ENST00000527003 TEX13CA0A0J9YWL9 993 aa3.38□□□□□ -1.87
C11orf54-204ENST00000527003 UBE2QL1A1L167 161 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms