RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 GZMKP49863 264 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 FZD5Q13467 585 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 TRAM1Q15629 374 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 CLEC9AQ6UXN8 241 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 SLCO4C1Q6ZQN7 724 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 ZNF554Q86TJ5 538 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 SNX18Q96RF0 628 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 GPA33Q99795 319 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 FOXB1Q99853 325 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 EGLN3Q9H6Z9 239 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 SF3B6Q9Y3B4 125 aaKnown RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 PEX16Q9Y5Y5 336 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 GMEB1Q9Y692 573 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 C3orf80F5H4A9 247 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 IGFBP6P24592 240 aaPredicted RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 SLC18A1P54219 525 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 SUMO3P55854 103 aaPredicted RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 AKAP14Q86UN6 197 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 UBE2DNLQ8IWF7 75 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 ANKRD53Q8N9V6 530 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 OR4K5Q8NGD3 323 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 POC1BQ8TC44 478 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 TFAP2CQ92754 450 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 GMPPAQ96IJ6 420 aaPredicted RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 STACQ99469 402 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 SMPD3Q9NY59 655 aaPredicted RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 PKD1L3Q7Z443 1732 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 AIREO43918 545 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 KDELR2P33947 212 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 UGT2B10P36537 528 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 GPR12P47775 334 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 RGNQ15493 299 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 MPEG1Q2M385 716 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 C6orf183Q5T699 404 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 TIGD3Q6B0B8 471 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 RDH10Q8IZV5 341 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 C1orf162Q8NEQ5 155 aaPredicted RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 PRSS33Q8NF86 280 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 OR52A5Q9H2C5 316 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 KAT8Q9H7Z6 458 aaKnown RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 CNOT11Q9UKZ1 510 aaKnown RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 TEX264Q9Y6I9 313 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 DOCK1Q14185 1865 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 TMPRSS2O15393 492 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 SASH3O75995 380 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 NPPAP01160 153 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 RPL5P46777 297 aaKnown RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 GSCP56915 257 aaPredicted RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 PCOLCEQ15113 449 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 CCSMST1Q4G0I0 132 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 PLAG1Q6DJT9 500 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 SFXN4Q6P4A7 337 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 FBXW12Q6X9E4 464 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 ZNF788Q6ZQV5 615 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 RBPMS2Q6ZRY4 209 aaKnown RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 SHISA5Q8N114 240 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 LRRC57Q8N9N7 239 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 OR51F2Q8NH61 342 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 FCGR1BQ92637 280 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 CACNG6Q9BXT2 260 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 OR11A1Q9GZK7 315 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 GAL3ST2Q9H3Q3 398 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 NT5DC2Q9H857 520 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 BTNL2Q9UIR0 455 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 PITPNC1Q9UKF7 332 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 WDR90Q96KV7 1748 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 CD96P40200 585 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 RORCP51449 518 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 LY6EQ16553 131 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 TRMT12Q53H54 448 aaKnown RBP8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 B3GNT9Q6UX72 402 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 STOML3Q8TAV4 291 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 ZC3H10Q96K80 434 aaKnown RBP8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 ALG8Q9BVK2 526 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 EMC7Q9NPA0 242 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 POMPQ9Y244 141 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 IGHV3OR16-10A0A075B7F0 116 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 A0A1W2PRX2 142 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 FOXH1O75593 365 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 KITLGP21583 273 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 TCF15Q12870 199 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 SH2D5Q6ZV89 423 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 FAM156AQ8NDB6 213 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 CRYGNQ8WXF5 182 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 CHIAQ9BZP6 476 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 C1orf123Q9NWV4 160 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 MYH3P11055 1940 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 FABP12A6NFH5 140 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 GTF2F2P13984 249 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 BAMBIQ13145 260 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 TMPRSS11FQ6ZWK6 438 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 ZDHHC23Q8IYP9 409 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 HS3ST5Q8IZT8 346 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 SLC25A45Q8N413 288 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 NPEPL1Q8NDH3 523 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 OR5R1Q8NH85 324 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 MYH8P13535 1937 aa8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 PIN1Q13526 163 aaPredicted RBP8.34□□□□□ -1.07
LIMCH1-202ENST00000381753 CYB5R2Q6BCY4 276 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms