RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 LAMP5Q9UJQ1 280 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 B3GALT5Q9Y2C3 310 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 CMAHPQ9Y471 501 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 RALGAPA1Q6GYQ0 2036 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 A0A087WV48 116 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 A0A0G2JMM0 328 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 A0A1W2PPB8 328 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 A0A1W2PRS3 328 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 KIR3DP1A8MWS1 328 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 CENPBD1B2RD01 187 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF814B7Z6K7 855 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 NPIPA5E9PKD4 350 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 HLA-DQA2P01906 255 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 SERPINA7P05543 415 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ALOX5APP20292 161 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 DPP4P27487 766 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ADH6P28332 368 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 HTR2BP41595 481 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 NANOS3P60323 173 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 CDC20Q12834 499 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 TRAM1Q15629 374 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 TBRG1Q3YBR2 411 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ACSM3Q53FZ2 586 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 Q5BKY6 102 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ACER2Q5QJU3 275 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 AGAP6Q5VW22 663 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 SLC35D2Q76EJ3 337 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 PXKQ7Z7A4 578 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 IL17RDQ8NFM7 739 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 OR1J4Q8NGS1 313 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 HSD17B8Q92506 261 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 PSMF1Q92530 271 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 MRPL48Q96GC5 212 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 AGAP4Q96P64 663 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 FYTTD1Q96QD9 318 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 GPR87Q9BY21 358 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 MIXL1Q9H2W2 232 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 MRPL22Q9NWU5 206 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 RABL2AQ9UBK7 228 aaPredicted RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 NPIPA1Q9UND3 350 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 SDK2Q58EX2 2172 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 C21orf140B9A014 251 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ZIC3O60481 467 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 FZD7O75084 574 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 RPP14O95059 124 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 KLK2P20151 261 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 MTNR1BP49286 362 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 DAP3P51398 398 aaKnown RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 P2RY4P51582 365 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 RPS11P62280 158 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 FMODQ06828 376 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 CDK10Q15131 360 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 TAB1Q15750 504 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 NHLRC1Q6VVB1 395 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 GTPBP8Q8N3Z3 284 aaPredicted RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 MS4A15Q8N5U1 240 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 THEM6Q8WUY1 208 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 SGCZQ96LD1 299 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 KLHL15Q96M94 604 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 AMELYQ99218 206 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 SDHCQ99643 169 aaPredicted RBP8.43□□□□□ -1.06
LINC00838-201ENST00000562956 ATF6BQ99941 703 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 EMC6Q9BV81 110 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 KCNG2Q9UJ96 466 aa8.43□□□□□ -1.06
LINC00838-201ENST00000562956 A0A087WZY1 265 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 A0A1W2PNV4 684 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 A0A1W2PPK0 400 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF593O00488 134 aaPredicted RBP8.42□□□□□ -1.06
LINC00838-201ENST00000562956 RAD1O60671 282 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 UPK3AO75631 287 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 MPZL1O95297 269 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 ABHD16AO95870 558 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 APOA1P02647 267 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 DNASE1L1P49184 302 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 DSCR4P56555 118 aaPredicted RBP8.42□□□□□ -1.06
LINC00838-201ENST00000562956 SNRPD2P62316 118 aaKnown RBP8.42□□□□□ -1.06
LINC00838-201ENST00000562956 CD83Q01151 205 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 MEP1BQ16820 701 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 TIGD3Q6B0B8 471 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 LRRC69Q6ZNQ3 347 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 NRARPQ7Z6K4 114 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 ZNF227Q86WZ6 799 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 BEST3Q8N1M1 668 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 YIPF7Q8N8F6 280 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 DEFB124Q8NES8 71 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 OR5H6Q8NGV6 325 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 OTOSQ8NHW6 89 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 THOC3Q96J01 351 aaKnown RBP8.42□□□□□ -1.06
LINC00838-201ENST00000562956 WDFY2Q96P53 400 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 KCNK17Q96T54 332 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 FANCFQ9NPI8 374 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 COA3Q9Y2R0 106 aaPredicted RBP8.42□□□□□ -1.06
LINC00838-201ENST00000562956 V9GYH0 126 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 IGKV1D-43A0A0B4J1Z2 117 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 A6NIZ1 184 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 NPIPB13A6NJU9 1138 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 NPIPB4C9JG80 1138 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 RAMP1O60894 148 aa8.42□□□□□ -1.06
LINC00838-201ENST00000562956 F10P00742 488 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms