RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ZNF224Q9NZL3 707 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 RHCGQ9UBD6 479 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 SLC7A8Q9UHI5 535 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 RPS6KA6Q9UK32 745 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 HIF3AQ9Y2N7 669 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 FAM32AQ9Y421 112 aaKnown RBP11.87□□□□□ -0.51
CXCL12-205ENST00000395794 HEATR1Q9H583 2144 aaKnown RBP11.87□□□□□ -0.51
CXCL12-205ENST00000395794 ZANQ9Y493 2812 aa11.87□□□□□ -0.51
CXCL12-205ENST00000395794 EFCAB9A8MZ26 197 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 M0R233 179 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 SYNGR3O43761 229 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 PIP5K1CO60331 668 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 ADRA2AP08913 450 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 DAOP14920 347 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 NR4A2P43354 598 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 SEC24CP53992 1094 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 PSME3P61289 254 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 HSF2Q03933 536 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 RUNX1T1Q06455 604 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 TOP3AQ13472 1001 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-205ENST00000395794 TBC1D28Q2M2D7 210 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 ANKDD1AQ495B1 522 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 ARMC4Q5T2S8 1044 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 FAM205BPQ63HN1 556 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 OAFQ86UD1 273 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 NRMQ8IXM6 262 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 RBM15BQ8NDT2 890 aaKnown RBP11.86□□□□□ -0.51
CXCL12-205ENST00000395794 FNDC8Q8TC99 324 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 ACOT11Q8WXI4 607 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-205ENST00000395794 HSH2DQ96JZ2 352 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 ZNF75AQ96N20 296 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 FOXN4Q96NZ1 517 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 KCNK17Q96T54 332 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 SEPHS2Q99611 448 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 MS4A5Q9H3V2 200 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 SIAEQ9HAT2 523 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 SMURF2Q9HAU4 748 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 CCNB1IP1Q9NPC3 277 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 SPAG4Q9NPE6 437 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 ADA2Q9NZK5 511 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 GMPR2Q9P2T1 348 aaKnown RBP11.86□□□□□ -0.51
CXCL12-205ENST00000395794 REV1Q9UBZ9 1251 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 DUSP13Q9UII6 198 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 GPR160Q9UJ42 338 aa11.86□□□□□ -0.51
CXCL12-205ENST00000395794 PLCE1Q9P212 2302 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 A0A096LNT2 108 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 A0A1W2PPW3 197 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 TMEM129A0AVI4 362 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 A6NIZ1 184 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 J3KTA2 159 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 IFNA2P01563 188 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 TSPAN19P0C672 248 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 PRDX6P30041 224 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 SLC9A3P48764 834 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 GZMKP49863 264 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 CTXN1P60606 82 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 RAP1BP61224 184 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 RPL27P61353 136 aaKnown RBP11.85□□□□□ -0.51
CXCL12-205ENST00000395794 RAP1AP62834 184 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 MRPS34P82930 218 aaKnown RBP11.85□□□□□ -0.51
CXCL12-205ENST00000395794 PRKCDQ05655 676 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 SGCAQ16586 387 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 CHRFAM7AQ494W8 412 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 THEM4Q5T1C6 240 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 C10orf128Q5T292 105 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 C6orf52Q5T4I8 152 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 C8orf82Q6P1X6 216 aaPredicted RBP11.85□□□□□ -0.51
CXCL12-205ENST00000395794 MBOAT2Q6ZWT7 520 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 LRRC18Q8N456 261 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 OR51A7Q8NH64 312 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 FGFBP3Q8TAT2 258 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 UBASH3BQ8TF42 649 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 NSMAFQ92636 917 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 SYT3Q9BQG1 590 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 ALG12Q9BV10 488 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 MRPL37Q9BZE1 423 aaKnown RBP11.85□□□□□ -0.51
CXCL12-205ENST00000395794 SNX13Q9Y5W8 968 aa11.85□□□□□ -0.51
CXCL12-205ENST00000395794 VWC2LB2RUY7 222 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 SLC2A10O95528 541 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 APEHP13798 732 aaKnown RBP11.84□□□□□ -0.51
CXCL12-205ENST00000395794 NCK1P16333 377 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 APLNRP35414 380 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 RPL4P36578 427 aaKnown RBP11.84□□□□□ -0.51
CXCL12-205ENST00000395794 RAD52P43351 418 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 KRT72Q14CN4 511 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 FXNQ16595 210 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 RGS7BPQ6MZT1 257 aaPredicted RBP11.84□□□□□ -0.51
CXCL12-205ENST00000395794 UNQ6126/PRO20091Q6UXV3 157 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 PRIMA1Q86XR5 153 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 HIPK1Q86Z02 1210 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 ZNF584Q8IVC4 421 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 ZCCHC24Q8N2G6 241 aaKnown RBP11.84□□□□□ -0.51
CXCL12-205ENST00000395794 C11orf40Q8WZ69 217 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 HDAC2Q92769 488 aaKnown RBP11.84□□□□□ -0.51
CXCL12-205ENST00000395794 MYLK2Q9H1R3 596 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 TPK1Q9H3S4 243 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 ANKRD19PQ9H560 264 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 KRCC1Q9NPI7 259 aaPredicted RBP11.84□□□□□ -0.51
CXCL12-205ENST00000395794 ABCD2Q9UBJ2 740 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms