RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Q8R3C1 574 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dyrk3Q922Y0 586 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Chp2Q9D869 196 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 SnapinQ9Z266 136 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn2r69G3XA45 850 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Hbb-bh0P04443 147 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Lin28bQ45KJ6 247 aaKnown RBP14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Kng2Q6S9I3 644 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Fpr-rs7Q71MR7 338 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cdk5rap1Q8BTW8 588 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr658Q8VGV5 323 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Actl6bQ99MR0 426 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Fbxo36Q9CQ24 188 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Scn10aQ6QIY3 1958 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 StrcQ8VIM6 1809 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Bcorl1A2AQH4 1781 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm21797J3QNW5 180 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Anxa11P97384 503 aaKnown RBP14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Nkx3-2P97503 333 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Adra1aP97718 466 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ctrb1Q9CR35 263 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Maf1Q9D0U6 258 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Pcm1Q9R0L6 2025 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cldn34aG3UW52 211 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dbil5O09035 87 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Pou2f1P25425 770 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Limk1P53668 647 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 CdaP56389 146 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rps27aP62983 156 aaKnown RBP14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Uba52P62984 128 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Riiad1Q3KNY5 119 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Atf7ip2Q3UL97 452 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gpr39Q5U431 456 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 ArhgdibQ61599 200 aaKnown RBP14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr714Q7TRN0 317 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc38a9Q8BGD6 560 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1099Q8VG37 312 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Chst11Q9JME2 352 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Bex2Q9WTZ8 129 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Zfp995E9Q6M3 437 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 EllO08856 602 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 MpoP11247 718 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Hsd3b3P26150 373 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Thbs1P35441 1170 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 HccsP53702 272 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cpne2P59108 548 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Htr1fQ02284 366 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc35f3Q1LZI2 421 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm5113Q3UGK8 141 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gls2Q571F8 602 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cd53Q61451 219 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Klhl9Q6ZPT1 617 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc25a40Q8BGP6 337 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Med19Q8C1S0 244 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Spata33Q8C624 132 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Irf2bplQ8K3X4 775 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Chrm3Q9ERZ3 589 aa14.35□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Col4a5Q63ZW6 1691 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn1r68E9Q0V3 319 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Pcdh12O55134 1180 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Emc8O70378 207 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 InipQ3TXT3 104 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1167Q7TR26 316 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr1134Q7TR43 312 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 SynprQ8BGN8 265 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Fn3krpQ8K274 309 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 AspaQ8R3P0 312 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr558Q8VGZ7 317 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Alg2Q9DBE8 415 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Lgi1Q9JIA1 557 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Adam26aQ9R158 697 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Pfdn5Q9WU28 154 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Fbxw28E9Q8A4 466 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 2410141K09RikK7N769 464 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn2r124K7N789 855 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 SnrpbP27048 231 aaKnown RBP14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 BidP70444 195 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 MeikinQ5F2C3 434 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc17a4Q5NCM1 492 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Tspan10Q8VCF5 331 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vmn1r172Q9EPS4 313 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Znf296E9Q6W4 445 aaKnown RBP14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 PrkacaP05132 351 aaKnown RBP14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Fpr1P33766 364 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Fabp5Q05816 135 aaKnown RBP14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Zfp987Q32P14 633 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mettl7a2Q5I0W6 244 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ranbp3lQ6PDH4 491 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Vrk1Q80X41 440 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc22a29Q8BWG6 551 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Commd1Q8K4M5 188 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 FevQ8QZW2 237 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mfsd6lQ8R3N2 586 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr669Q8VGU9 317 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 NifkQ91VE6 317 aaKnown RBP14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cavin3Q91VJ2 260 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Moap1Q9ERH6 352 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 4931429L15RikE9PVU2 379 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rnf165E9QAU8 347 aa14.34□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Syt3O35681 587 aa14.34□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms