Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm25239-201ENSMUST00000174915 86 ntBASIC37.11■■■■□ 3.53
Vrk1Q80X41 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Vrk1Q80X41 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Vrk1Q80X41 Gm15042-201ENSMUST00000120212 883 ntBASIC32.3■■■□□ 2.76
Vrk1Q80X41 Gm24109-201ENSMUST00000175489 103 ntBASIC32.2■■■□□ 2.75
Vrk1Q80X41 Gm15045-201ENSMUST00000117359 883 ntBASIC31.54■■■□□ 2.64
Vrk1Q80X41 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Vrk1Q80X41 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Vrk1Q80X41 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Vrk1Q80X41 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Vrk1Q80X41 Gm23366-201ENSMUST00000175022 89 ntBASIC30.99■■■□□ 2.55
Vrk1Q80X41 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Vrk1Q80X41 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Vrk1Q80X41 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Vrk1Q80X41 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.09■■■□□ 2.41
Vrk1Q80X41 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
Vrk1Q80X41 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Vrk1Q80X41 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.85■■■□□ 2.37
Vrk1Q80X41 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.8■■■□□ 2.36
Vrk1Q80X41 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Vrk1Q80X41 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Vrk1Q80X41 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Vrk1Q80X41 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.54■■■□□ 2.32
Vrk1Q80X41 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Vrk1Q80X41 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Vrk1Q80X41 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Vrk1Q80X41 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Vrk1Q80X41 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.36■■■□□ 2.29
Vrk1Q80X41 Gm25238-201ENSMUST00000174914 89 ntBASIC29.33■■■□□ 2.29
Vrk1Q80X41 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Vrk1Q80X41 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Vrk1Q80X41 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Vrk1Q80X41 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.97■■■□□ 2.23
Vrk1Q80X41 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Vrk1Q80X41 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Vrk1Q80X41 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
Vrk1Q80X41 Psd-208ENSMUST00000224556 2034 ntBASIC28.65■■■□□ 2.18
Vrk1Q80X41 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Vrk1Q80X41 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Vrk1Q80X41 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.53■■■□□ 2.16
Vrk1Q80X41 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Vrk1Q80X41 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
Vrk1Q80X41 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.43■■■□□ 2.14
Vrk1Q80X41 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.39■■■□□ 2.13
Vrk1Q80X41 Gm27325-201ENSMUST00000175467 74 ntBASIC28.29■■■□□ 2.12
Vrk1Q80X41 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.22■■■□□ 2.11
Vrk1Q80X41 Gm25262-201ENSMUST00000174934 133 ntBASIC28.19■■■□□ 2.1
Vrk1Q80X41 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Vrk1Q80X41 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Vrk1Q80X41 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Vrk1Q80X41 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Vrk1Q80X41 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Vrk1Q80X41 Rab21-202ENSMUST00000218831 843 ntBASIC27.87■■■□□ 2.05
Vrk1Q80X41 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.86■■■□□ 2.05
Vrk1Q80X41 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Vrk1Q80X41 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.81■■■□□ 2.04
Vrk1Q80X41 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.79■■■□□ 2.04
Vrk1Q80X41 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Vrk1Q80X41 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.75■■■□□ 2.03
Vrk1Q80X41 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Vrk1Q80X41 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.65■■■□□ 2.02
Vrk1Q80X41 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.65■■■□□ 2.02
Vrk1Q80X41 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
Vrk1Q80X41 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Vrk1Q80X41 Gm26115-201ENSMUST00000175605 87 ntBASIC27.54■■■□□ 2
Vrk1Q80X41 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Vrk1Q80X41 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.52■■■□□ 2
Vrk1Q80X41 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Vrk1Q80X41 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Vrk1Q80X41 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Vrk1Q80X41 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.46■■□□□ 1.99
Vrk1Q80X41 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.43■■□□□ 1.98
Vrk1Q80X41 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.41■■□□□ 1.98
Vrk1Q80X41 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Vrk1Q80X41 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Vrk1Q80X41 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Vrk1Q80X41 Gm8109-201ENSMUST00000194076 746 ntBASIC27.35■■□□□ 1.97
Vrk1Q80X41 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Vrk1Q80X41 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Vrk1Q80X41 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Vrk1Q80X41 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.28■■□□□ 1.96
Vrk1Q80X41 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Vrk1Q80X41 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.22■■□□□ 1.95
Vrk1Q80X41 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Vrk1Q80X41 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Vrk1Q80X41 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Vrk1Q80X41 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Vrk1Q80X41 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Vrk1Q80X41 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.05■■□□□ 1.92
Vrk1Q80X41 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Vrk1Q80X41 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Vrk1Q80X41 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Vrk1Q80X41 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Vrk1Q80X41 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Vrk1Q80X41 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.96■■□□□ 1.91
Vrk1Q80X41 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Vrk1Q80X41 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Vrk1Q80X41 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.89■■□□□ 1.9
Vrk1Q80X41 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
Vrk1Q80X41 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.88■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms