RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Hebp2Q9WU63 205 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 OpcmlG5E8G3 345 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Grcc10O35127 126 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Hoxd12P23812 268 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Tead1P30051 426 aaKnown RBP14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Crmp1P97427 572 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rhox11Q810N8 206 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 SargQ8BI29 606 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gpr107Q8BUV8 551 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr54Q8VFE6 313 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Egln3Q91UZ4 239 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dusp7Q91Z46 422 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mrgpra7Q91ZC5 305 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Borcs8Q9D6Y4 120 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Tlr1Q9EPQ1 795 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Sphk2Q9JIA7 617 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Tp73Q9JJP2 631 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Nrg4Q9WTX4 115 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Lamb2Q61292 1799 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Klhl15A2AAX3 604 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Lcn11A2BHR2 178 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 KitlgP20826 273 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mbl2P41317 244 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Eif4ebp2P70445 120 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Otx2P80206 289 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Lpar5Q149R9 372 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Klri2Q5DT36 248 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Fbxo5Q7TSG3 421 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mrpl22Q8BU88 206 aaKnown RBP14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Nectin4Q8R007 508 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 1700029P11RikQ9CQ68 150 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 GltpQ9JL62 209 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Dapp1Q9QXT1 280 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Espl1P60330 2118 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ppp1r3dA2AJW4 279 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr601A2RS33 314 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm20518E9Q548 580 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 P01679 107 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc19a1P41438 512 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Stoml3Q6PE84 287 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Zfp429Q7M6Y0 485 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Inpp5kQ8C5L6 468 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Angptl6Q8R0Z6 457 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Med25Q8VCB2 745 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Slc25a37Q920G8 338 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Elp5Q99L85 300 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Pde7bQ9QXQ1 446 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 SrrQ9QZX7 339 aa14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Igf2rQ07113 2483 aaKnown RBP14.37□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Lrrc28Q3TX51 367 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 AbraclQ4KML4 81 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Krt33bQ61897 404 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cdk3Q80YP0 303 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 B4galt7Q8R087 327 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr522Q8VGL1 312 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Eps8l3Q91WL0 600 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Arfgap3Q9D8S3 523 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rnaset2aC0HKG5 259 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rnaset2bC0HKG6 259 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr619E9PV95 320 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ppt1O88531 306 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ercc1P07903 298 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Hoxc11P31313 304 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 MocosQ14CH1 862 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Fam69cQ8BQT2 410 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gpr89aQ8BS95 455 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cuedc1Q8R3V6 388 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr676Q8VGZ9 317 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ropn1lQ9EQ00 218 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 MNCb-2990Q9JJ93 142 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Kcnj10Q9JM63 379 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Pla2g2fQ9QZT4 168 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 PlpbpQ9Z2Y8 274 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm13124A2A752 406 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Ajm1A2AJA9 974 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 B3gat2P59270 324 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gng8P63078 70 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 MybphP70402 483 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Q3USZ8 430 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 CrhbpQ60571 322 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Sez6Q7TSK2 991 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 MallQ91X49 154 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 S100a16Q9D708 124 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cpne6Q9Z140 557 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm8797A0A0A6YW67 77 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Rhox2fA2ANE0 191 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Gm10269G3UWD7 123 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 P01878 344 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 UbbP0CG49 305 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 UbcP0CG50 734 aaKnown RBP14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Csrp3P50462 194 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Itgb8Q0VBD0 767 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 March9Q3TZ87 348 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Mccc2Q3ULD5 563 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cobll1Q3UMF0 1273 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Cnrip1Q5M8N0 164 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Adam20Q7M763 760 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Olfr774Q7TRI5 312 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 Q80VP5 184 aa14.36□□□□□ -0.11
Ccdc88b-201ENSMUST00000113440 FarsaQ8C0C7 508 aa14.36□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 126.5 ms