Protein–RNA interactions for Protein: Q8R007

Nectin4, Nectin-4, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nectin4Q8R007 Gm25239-201ENSMUST00000174915 86 ntBASIC35.29■■■■□ 3.24
Nectin4Q8R007 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Nectin4Q8R007 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Nectin4Q8R007 Gm15042-201ENSMUST00000120212 883 ntBASIC30.97■■■□□ 2.55
Nectin4Q8R007 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Nectin4Q8R007 Gm24109-201ENSMUST00000175489 103 ntBASIC30.49■■■□□ 2.47
Nectin4Q8R007 Gm15045-201ENSMUST00000117359 883 ntBASIC30.27■■■□□ 2.44
Nectin4Q8R007 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Nectin4Q8R007 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Nectin4Q8R007 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
Nectin4Q8R007 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Nectin4Q8R007 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Nectin4Q8R007 Gm23366-201ENSMUST00000175022 89 ntBASIC29.53■■■□□ 2.32
Nectin4Q8R007 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Nectin4Q8R007 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Nectin4Q8R007 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Nectin4Q8R007 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.87■■■□□ 2.21
Nectin4Q8R007 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Nectin4Q8R007 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Nectin4Q8R007 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Nectin4Q8R007 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Nectin4Q8R007 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.45■■■□□ 2.14
Nectin4Q8R007 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Nectin4Q8R007 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Nectin4Q8R007 Psd-208ENSMUST00000224556 2034 ntBASIC28.39■■■□□ 2.14
Nectin4Q8R007 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Nectin4Q8R007 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Nectin4Q8R007 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.25■■■□□ 2.11
Nectin4Q8R007 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.21■■■□□ 2.11
Nectin4Q8R007 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.13■■■□□ 2.09
Nectin4Q8R007 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Nectin4Q8R007 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Nectin4Q8R007 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Nectin4Q8R007 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Nectin4Q8R007 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.83■■■□□ 2.05
Nectin4Q8R007 Gm25238-201ENSMUST00000174914 89 ntBASIC27.81■■■□□ 2.04
Nectin4Q8R007 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.77■■■□□ 2.04
Nectin4Q8R007 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Nectin4Q8R007 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Nectin4Q8R007 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Nectin4Q8R007 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Nectin4Q8R007 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Nectin4Q8R007 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
Nectin4Q8R007 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.28■■□□□ 1.96
Nectin4Q8R007 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Nectin4Q8R007 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.24■■□□□ 1.95
Nectin4Q8R007 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Nectin4Q8R007 Gm27325-201ENSMUST00000175467 74 ntBASIC27.15■■□□□ 1.94
Nectin4Q8R007 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Nectin4Q8R007 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Nectin4Q8R007 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Nectin4Q8R007 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.01■■□□□ 1.91
Nectin4Q8R007 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.99■■□□□ 1.91
Nectin4Q8R007 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.92■■□□□ 1.9
Nectin4Q8R007 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
Nectin4Q8R007 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.87■■□□□ 1.89
Nectin4Q8R007 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Nectin4Q8R007 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Nectin4Q8R007 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Nectin4Q8R007 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Nectin4Q8R007 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
Nectin4Q8R007 Gm25262-201ENSMUST00000174934 133 ntBASIC26.64■■□□□ 1.86
Nectin4Q8R007 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Nectin4Q8R007 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Nectin4Q8R007 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.61■■□□□ 1.85
Nectin4Q8R007 Rab21-202ENSMUST00000218831 843 ntBASIC26.6■■□□□ 1.85
Nectin4Q8R007 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Nectin4Q8R007 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Nectin4Q8R007 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Nectin4Q8R007 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Nectin4Q8R007 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nectin4Q8R007 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.51■■□□□ 1.83
Nectin4Q8R007 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nectin4Q8R007 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Nectin4Q8R007 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Nectin4Q8R007 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.41■■□□□ 1.82
Nectin4Q8R007 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Nectin4Q8R007 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Nectin4Q8R007 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nectin4Q8R007 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.3■■□□□ 1.8
Nectin4Q8R007 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Nectin4Q8R007 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nectin4Q8R007 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nectin4Q8R007 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nectin4Q8R007 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.2■■□□□ 1.79
Nectin4Q8R007 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Nectin4Q8R007 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.17■■□□□ 1.78
Nectin4Q8R007 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.15■■□□□ 1.78
Nectin4Q8R007 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.09■■□□□ 1.77
Nectin4Q8R007 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.07■■□□□ 1.76
Nectin4Q8R007 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nectin4Q8R007 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nectin4Q8R007 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nectin4Q8R007 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Nectin4Q8R007 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nectin4Q8R007 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nectin4Q8R007 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.95■■□□□ 1.74
Nectin4Q8R007 Gm26115-201ENSMUST00000175605 87 ntBASIC25.91■■□□□ 1.74
Nectin4Q8R007 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nectin4Q8R007 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.86■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms