RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PAICSP22234 425 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 CD96P40200 585 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 RBM34P42696 430 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 RAP2BP61225 183 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 PITPNAQ00169 270 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 HLXQ14774 488 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 RPL13AP3Q6NVV1 102 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 NIPAL3Q6P499 406 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 SAMD12Q8N8I0 201 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 OR4D10Q8NGI6 311 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 OR4C6Q8NH72 309 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 PHOSPHO1Q8TCT1 267 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 SLC46A1Q96NT5 459 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 TBX5Q99593 518 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 UBQLN4Q9NRR5 601 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 CTSFQ9UBX1 484 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 DUX4Q9UBX2 424 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 SLC6A5Q9Y345 797 aa15.52■□□□□ 0.08
SHKBP1-205ENST00000594973 C2orf92A0A1B0GVN3 265 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 EFCAB7A8K855 629 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 OIP5O43482 229 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 HPXP02790 462 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 CLUP10909 449 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 CELP19835 753 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 EPHA8P29322 1005 aaPredicted RBP15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 THBS2P35442 1172 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 PPICP45877 212 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 ELAVL1Q15717 326 aaKnown RBP15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 PRPF38BQ5VTL8 546 aaKnown RBP15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 METTL11BQ5VVY1 283 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 CBLN3Q6UW01 205 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 APOOLQ6UXV4 268 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 BMPERQ8N8U9 685 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 OR52N1Q8NH53 320 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 OR1S1Q8NH92 325 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF721Q8TF20 911 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 NSMAFQ92636 917 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 NUDT9Q9BW91 350 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 DNTTIP1Q9H147 329 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 BIN3Q9NQY0 253 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 CMC2Q9NRP2 79 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 MLXQ9UH92 298 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 PI4KAP42356 2102 aa15.52■□□□□ 0.07
SHKBP1-205ENST00000594973 CD8B2A6NJW9 211 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 FAM74A7A6NL05 159 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 ANXA2P2A6NMY6 339 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 PRR23D1E9PI22 279 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 SCDO00767 359 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 RGS9O75916 674 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 UTS2O95399 124 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 IGKV3-11P04433 115 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 PRR23D2P0DMB1 279 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 CD8BP10966 210 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 S100A11P31949 105 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 HAAOP46952 286 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 CCR6P51684 374 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 GXYLT1Q4G148 440 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 FAM74A3Q4VXF1 159 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 LINC00114Q6XXX2 140 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF574Q6ZN55 896 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 MEPCEQ7L2J0 689 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 GID4Q8IVV7 300 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 KLHL36Q8N4N3 616 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 LRRC46Q96FV0 321 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 VN1R1Q9GZP7 353 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF768Q9H5H4 540 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 MKKSQ9NPJ1 570 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 GPR160Q9UJ42 338 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 FBXL4Q9UKA2 621 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 EXOGQ9Y2C4 368 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 SLC35A3Q9Y2D2 325 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 HEATR5AQ86XA9 2040 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 RIIAD1A6NNX1 92 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 REM1O75628 298 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 UBL3O95164 117 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 SNAPINO95295 136 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 GYPBP06028 91 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 PPP3CBP16298 524 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 POU3F2P20265 443 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 ZSWIM7Q19AV6 140 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 FAM209BQ5JX69 171 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 NR2C2APQ86WQ0 139 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 MAFAQ8NHW3 353 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 PIGKQ92643 395 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 NKX6-2Q9C056 277 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 C20orf85Q9H1P6 137 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 PIPOXQ9P0Z9 390 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 SEMA5BQ9P283 1151 aa15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 PCDHGA9Q9Y5G4 932 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-205ENST00000594973 A0A1B0GUH1 482 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 IL33O95760 270 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 MRPL3P09001 348 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 GABRA1P14867 456 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 CPN1P15169 458 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 GPR143P51810 404 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 BDH1Q02338 343 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 FHL1Q13642 323 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 CRMP1Q14194 572 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 ALKAL2Q6UX46 152 aa15.5■□□□□ 0.07
SHKBP1-205ENST00000594973 LANCL3Q6ZV70 420 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms