RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 WDR88Q6ZMY6 472 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 CCDC80Q76M96 950 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 PIWIL3Q7Z3Z3 882 aaKnown RBP12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 WDFY1Q8IWB7 410 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 SPATA3Q8NHX4 192 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 ZNF566Q969W8 418 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 TAS2R5Q9NYW4 299 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 GLTPQ9NZD2 209 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 ZNF229Q9UJW7 825 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 FBXL3Q9UKT7 428 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 BAG5Q9UL15 447 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 KCNS2Q9ULS6 477 aa12.94□□□□□ -0.34
CCNDBP1-213ENST00000568507 CUBNO60494 3623 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 LOC100289279A0A1B0GTE1 492 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 TMEM129A0AVI4 362 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 BLOC1S5-TXNDC5H3BN57 136 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 FBP2O00757 339 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 LYPD3O95274 346 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 BCL10O95999 233 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 ADRA2AP08913 450 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 H2AFXP16104 143 aaPredicted RBP12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 ZNF14P17017 642 aaPredicted RBP12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 GIPRP48546 466 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 GZMMP51124 257 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 ARFIP2P53365 341 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 FAM166AQ6J272 317 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 NANOGNBQ7Z5D8 188 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 CARM1Q86X55 608 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 ZCCHC24Q8N2G6 241 aaKnown RBP12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 LRRC17Q8N6Y2 441 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 TMEM54Q969K7 222 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 LRRC58Q96CX6 371 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 SLC25A44Q96H78 314 aaPredicted RBP12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 PCDHAC1Q9H158 963 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 SH3GLB1Q9Y371 365 aa12.93□□□□□ -0.34
CCNDBP1-213ENST00000568507 SVEP1Q4LDE5 3571 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 CHD3Q12873 2000 aaKnown RBP12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 ATRQ13535 2644 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 IGHV4-61A0A0C4DH41 118 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 RNF212BA8MTL3 300 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 FARS2O95363 451 aaKnown RBP12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 STAMBPO95630 424 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 NPPAP01160 153 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 IFNA14P01570 189 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 GLRXP35754 106 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 EVX1P49640 407 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 TAS2R41P59536 307 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 RPS23P62266 143 aaKnown RBP12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 MELKQ14680 651 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 RAB39AQ14964 217 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 MAPRE2Q15555 327 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 RABL3Q5HYI8 236 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 ERICH5Q6P6B1 374 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 SKA3Q8IX90 412 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 CDK20Q8IZL9 346 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 OR8J3Q8NGG0 315 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 UBASH3BQ8TF42 649 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 BPESC1Q9GZL8 116 aa12.92□□□□□ -0.34
CCNDBP1-213ENST00000568507 FBN1P35555 2871 aaKnown RBP12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 A0A1W2PRG6 482 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 BBIP1A8MTZ0 92 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 MCIDASD6RGH6 385 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 MRASO14807 208 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 QDPRP09417 244 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 ASAH2BP0C7U1 165 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 PATE4P0C8F1 98 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 OR8G3PP0DMU2 310 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 ZNF35P13682 527 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 ZNF23P17027 643 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 FUT1P19526 365 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 CLRN1P58418 232 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 KLF10Q13118 480 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 COQ5Q5HYK3 327 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 REP15Q6BDI9 236 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 DEF8Q6ZN54 512 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 TSPYL5Q86VY4 417 aaPredicted RBP12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 CALHM3Q86XJ0 350 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 SLC22A24Q8N4F4 322 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 PCYOX1LQ8NBM8 494 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 TMEM158Q8WZ71 300 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 MRPL24Q96A35 216 aaKnown RBP12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 MSI2Q96DH6 328 aaKnown RBP12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 PRSS27Q9BQR3 290 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 ZNF426Q9BUY5 554 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 MRPL37Q9BZE1 423 aaKnown RBP12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 POLR2J2Q9GZM3 115 aaKnown RBP12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 POLR2J3Q9H1A7 115 aaKnown RBP12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 RNF121Q9H920 327 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 CHODLQ9H9P2 273 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 GID8Q9NWU2 228 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 REV1Q9UBZ9 1251 aa12.91□□□□□ -0.34
CCNDBP1-213ENST00000568507 COL6A5A8TX70 2615 aa12.9□□□□□ -0.34
CCNDBP1-213ENST00000568507 LOC100653049A0A140TA62 436 aa12.9□□□□□ -0.34
CCNDBP1-213ENST00000568507 DHHO43323 396 aa12.9□□□□□ -0.34
CCNDBP1-213ENST00000568507 SYNGR3O43761 229 aa12.9□□□□□ -0.34
CCNDBP1-213ENST00000568507 SASH3O75995 380 aa12.9□□□□□ -0.34
CCNDBP1-213ENST00000568507 KRT34O76011 436 aa12.9□□□□□ -0.34
CCNDBP1-213ENST00000568507 OR5F1O95221 314 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms