RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 HLA-CQ95604 372 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 TEAD3Q99594 435 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 LMAN1LQ9HAT1 526 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 PLEKHA2Q9HB19 425 aa9.54□□□□□ -0.88
LIN54-202ENST00000442461 GLTPD2A6NH11 291 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 TRAF3IP2O43734 574 aaPredicted RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 AIFM1O95831 613 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 IGF2P01344 180 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 GSK3AP49840 483 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 FOXK2Q01167 660 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ENDOGQ14249 297 aaKnown RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 CMTM1Q8IZ96 169 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 SIGLECL1Q8N7X8 197 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 TMEM99Q8N816 258 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 MDGA1Q8NFP4 955 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 OR13C5Q8NGS8 318 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 NUBPLQ8TB37 319 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ADAT1Q9BUB4 502 aaKnown RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 SELENOIQ9C0D9 397 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 AK3Q9UIJ7 227 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 PLAGL1Q9UM63 463 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 A0A087WV62 115 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 K7ERU9 68 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 YIF1AO95070 293 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ASGR2P07307 311 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 PRR35P0CG20 571 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 TEAD1P28347 426 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ARL3P36405 182 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ID2Q02363 134 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 SKP2Q13309 424 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 CCINQ13939 588 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 SLC10A1Q14973 349 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ELAVL1Q15717 326 aaKnown RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 TEX30Q5JUR7 227 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 TMEM201Q5SNT2 666 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 OR4C11Q6IEV9 310 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 C8orf82Q6P1X6 216 aaPredicted RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 TGIF2LXQ8IUE1 241 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 UBTD2Q8WUN7 234 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ZNF689Q96CS4 500 aaPredicted RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 PLAC1Q9HBJ0 212 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 KLHL13Q9P2N7 655 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 TRAV1-2A0A0B4J238 106 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 FGF2P09038 288 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 EDN3P14138 238 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 TRHRP34981 398 aaPredicted RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 GABRA2P47869 451 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 MIDNQ504T8 468 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 PKDCCQ504Y2 493 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 VRK2Q86Y07 508 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 SLC35G3Q8N808 338 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 SECTM1Q8WVN6 248 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 NEIL2Q969S2 332 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 MS4A10Q96PG2 267 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 TEX101Q9BY14 249 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ZNF442Q9H7R0 627 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 KCNG2Q9UJ96 466 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 A0A1W2PPQ1 181 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 FITM1A5D6W6 292 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 HIDE1A8MVS5 230 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 EIF1BO60739 113 aaKnown RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 SERPINE2P07093 398 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 METTL15P1P0C7V9 234 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 EIF1P41567 113 aaKnown RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 OR8G1Q15617 311 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
LIN54-202ENST00000442461 TMEM31Q5JXX7 168 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 TFAP2EQ6VUC0 442 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 ZNF687Q8N1G0 1237 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 OR5D14Q8NGL3 314 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 DTD2Q96FN9 168 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 GPR87Q9BY21 358 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 CHST8Q9H2A9 424 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 SRMSQ9H3Y6 488 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 PPP1R3EQ9H7J1 279 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 A4GALTQ9NPC4 353 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 PLEKHJ1Q9NW61 149 aa9.53□□□□□ -0.88
LIN54-202ENST00000442461 PHRF1Q9P1Y6 1649 aaKnown RBP9.52□□□□□ -0.88
LIN54-202ENST00000442461 NUP214P35658 2090 aaPredicted RBP9.52□□□□□ -0.88
LIN54-202ENST00000442461 C3P01024 1663 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 TRBV23OR9-2A0A075B6M9 112 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 LRP5LA4QPB2 252 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 H0YIV9 168 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 JMJD7P0C870 316 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 NPY4RP50391 375 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 PMS2P11Q13670 270 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 HNF4GQ14541 408 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 PDGFRLQ15198 375 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 SGCAQ16586 387 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 ATPAF1Q5TC12 328 aaPredicted RBP9.52□□□□□ -0.88
LIN54-202ENST00000442461 RTL6Q6ICC9 239 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 MRM1Q6IN84 353 aaKnown RBP9.52□□□□□ -0.88
LIN54-202ENST00000442461 TCTN3Q6NUS6 607 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 ANKRD16Q6P6B7 361 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 CXCL17Q6UXB2 119 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 LRRTM4Q86VH4 590 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 TMEM37Q8WXS4 190 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 RAB24Q969Q5 203 aa9.52□□□□□ -0.88
LIN54-202ENST00000442461 NEURL3Q96EH8 262 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms