RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 GSK3BP49841 420 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 NUDT6P53370 316 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 LSM11P83369 360 aaKnown RBP eCLIP15.35■□□□□ 0.05
LSM5-204ENST00000409909 CHRNB3Q05901 458 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 RUNX1T1Q06455 604 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 PIGFQ07326 219 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 NPRL3Q12980 569 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 ADIPOQQ15848 244 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 KRTAP21-3Q3LHN1 58 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 OR10H5Q8NGA6 315 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 LIPHQ8WWY8 451 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 SGTBQ96EQ0 304 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 SLC25A44Q96H78 314 aaPredicted RBP15.35■□□□□ 0.05
LSM5-204ENST00000409909 FOXB1Q99853 325 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 IGHV4-30-2A0A087WSY4 118 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 PIP5K1CO60331 668 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 BCL10O95999 233 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 OR4A8P0C604 315 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 TSPAN19P0C672 248 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 PGA4P0DJD7 388 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 PGA3P0DJD8 388 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 CD79AP11912 226 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 DRD4P21917 467 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 AQP2P41181 271 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 YAP1P46937 504 aaKnown RBP15.34■□□□□ 0.05
LSM5-204ENST00000409909 NUDT2P50583 147 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 GSG1Q2KHT4 349 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 VHLLQ6RSH7 139 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 NUP37Q8NFH4 326 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 OR4F15Q8NGB8 312 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 MOSPD2Q8NHP6 518 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 FGFBP3Q8TAT2 258 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 LZICQ8WZA0 190 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 ZNF566Q969W8 418 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 PRRC1Q96M27 445 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 FAM107BQ9H098 131 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 MAN2C1Q9NTJ4 1040 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 RHCGQ9UBD6 479 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 MED31Q9Y3C7 131 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 PMF1-BGLAPU3KQ54 211 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 ABCA2Q9BZC7 2435 aa15.34■□□□□ 0.05
LSM5-204ENST00000409909 J3KTA2 159 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 FFAR1O14842 300 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 GSTA4O15217 222 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 SNX3O60493 162 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 LY6HO94772 140 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 ZNF682O95780 498 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 BMP4P12644 408 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 ZNF14P17017 642 aaPredicted RBP15.33■□□□□ 0.04
LSM5-204ENST00000409909 THBS4P35443 961 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 EFNA4P52798 201 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 GYS2P54840 703 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 ST3GAL3Q11203 375 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 LAPTM4AQ15012 233 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 HIST3H3Q16695 136 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 CBLL1Q75N03 491 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 SKA3Q8IX90 412 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 ZNF525Q8N782 197 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 RHNO1Q9BSD3 238 aa15.33■□□□□ 0.04
LSM5-204ENST00000409909 MRPL13Q9BYD1 178 aaKnown RBP15.33■□□□□ 0.04
LSM5-204ENST00000409909 A0A096LNT2 108 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 DHHO43323 396 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 PDE5AO76074 875 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 F12P00748 615 aaPredicted RBP15.32■□□□□ 0.04
LSM5-204ENST00000409909 IFNW1P05000 195 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 QDPRP09417 244 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 PATE4P0C8F1 98 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 NCK1P16333 377 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 PCSK6P29122 969 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 LSP1P33241 339 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 GIPRP48546 466 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 PSME3P61289 254 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 EFNB3Q15768 340 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 PIWIL3Q7Z3Z3 882 aaKnown RBP15.32■□□□□ 0.04
LSM5-204ENST00000409909 MEX3DQ86XN8 651 aaKnown RBP15.32■□□□□ 0.04
LSM5-204ENST00000409909 IL17RDQ8NFM7 739 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 ASB10Q8WXI3 467 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 NANOS1Q8WY41 292 aaKnown RBP15.32■□□□□ 0.04
LSM5-204ENST00000409909 CMTM5Q96DZ9 223 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 ZNF347Q96SE7 839 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 SEPHS2Q99611 448 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 PLK3Q9H4B4 646 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 INIPQ9NRY2 104 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 TMEM38BQ9NVV0 291 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 ABCD2Q9UBJ2 740 aa15.32■□□□□ 0.04
LSM5-204ENST00000409909 A0A1W2PRG6 482 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 B9A039 149 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 INAFM1C9JVW0 142 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 SERPINA1P01009 418 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 IGHG1P01857 330 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 ZNF35P13682 527 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 MAKP20794 623 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 PTDSS1P48651 473 aaKnown RBP15.31■□□□□ 0.04
LSM5-204ENST00000409909 DSCR9P59020 149 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 SNRPD2P62316 118 aaKnown RBP15.31■□□□□ 0.04
LSM5-204ENST00000409909 RAB1AP62820 205 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 MYBPC1Q00872 1141 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 ARMC4Q5T2S8 1044 aa15.31■□□□□ 0.04
LSM5-204ENST00000409909 CLEC2AQ6UVW9 174 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms