RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ARMC8Q8IUR7 673 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 C10orf53Q8N6V4 93 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 UBASH3BQ8TF42 649 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 HPS1Q92902 700 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 TXNDC15Q96J42 360 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 MOGAT1Q96PD6 335 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 EBF4Q9BQW3 602 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CCDC28BQ9BUN5 200 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 C19orf24Q9BVV8 132 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 EVA1AQ9H8M9 152 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SLC52A3Q9NQ40 469 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 MED29Q9NX70 200 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 MRPL39Q9NYK5 338 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SPEF1Q9Y4P9 236 aa16.99■□□□□ 0.31
TNFRSF1B-204ENST00000536782 TRBV5-3A0A0A0MS03 114 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 LILRA1O75019 489 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 AQP1P29972 269 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CDH12P55289 794 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 PIGFQ07326 219 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SWT1Q5T5J6 900 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 NHLRC1Q6VVB1 395 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ZNF627Q7L945 461 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 HIPK4Q8NE63 616 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 OR6N1Q8NGY5 312 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 MS4A3Q96HJ5 214 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 TMEM43Q9BTV4 400 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ULBP2Q9BZM5 246 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 IKZF5Q9H5V7 419 aa16.98■□□□□ 0.31
TNFRSF1B-204ENST00000536782 TPST2O60704 377 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 IGFBP1P08833 259 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 IFNGR1P15260 489 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 B4GALT1P15291 398 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ZNF14P17017 642 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 AHCYP23526 432 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 APEX1P27695 318 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 EVX1P49640 407 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 AQP5P55064 265 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SRSF2Q01130 221 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 CAMK2DQ13557 499 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 TRMT5Q32P41 509 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 PXKQ7Z7A4 578 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 LRRC8CQ8TDW0 803 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 MRPL24Q96A35 216 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ZNF75AQ96N20 296 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SNX18Q96RF0 628 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 WFDC6Q9BQY6 131 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 TPK1Q9H3S4 243 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 DENND2DQ9H6A0 471 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SLCO1B3Q9NPD5 702 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ANGPT4Q9Y264 503 aa16.97■□□□□ 0.31
TNFRSF1B-204ENST00000536782 LRRN3E7EW58 273 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 PLPP3O14495 311 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SYNGR3O43761 229 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 SERPINI2O75830 405 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 MFN2O95140 757 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 MT-ATP6P00846 226 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 ZNF35P13682 527 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 IL2RGP31785 369 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 PTDSS1P48651 473 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 RIN1Q13671 783 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 AGKQ53H12 422 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 LIPNQ5VXI9 398 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 LINC01356Q8N9X3 169 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 FOXB1Q99853 325 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 MRPL37Q9BZE1 423 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 MS4A5Q9H3V2 200 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 REV1Q9UBZ9 1251 aa16.96■□□□□ 0.31
TNFRSF1B-204ENST00000536782 M0R233 179 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 FMO6PO60774 539 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RAB36O95755 333 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 GLRXP35754 106 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 GIPRP48546 466 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 CSNK1A1P48729 337 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ATP4BP51164 291 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RAB1AP62820 205 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 GALK2Q01415 458 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 GKAP1Q5VSY0 366 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ZNF613Q6PF04 617 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 UGT2A3Q6UWM9 527 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 WDFY1Q8IWB7 410 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SMYD1Q8NB12 490 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 OR5J2Q8NH18 312 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 DYDC1Q8WWB3 177 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 MCHR1Q99705 422 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ZNF224Q9NZL3 707 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 TMEFF2Q9UIK5 374 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 FBXL3Q9UKT7 428 aa16.95■□□□□ 0.3
TNFRSF1B-204ENST00000536782 LYNX1G3V0Z9 82 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 SASH3O75995 380 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 UBL3O95164 117 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 OR6A2O95222 327 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 C8BP07358 591 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 ADORA3P0DMS8 318 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 LYNX1P0DP58 116 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 BIDP55957 195 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RPS23P62266 143 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 TRIP10Q15642 601 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 MSMPQ1L6U9 139 aa16.94■□□□□ 0.3
TNFRSF1B-204ENST00000536782 RUNDC3AQ59EK9 446 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms