RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 SLC25A44Q96H78 314 aaPredicted RBP17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 PSMG3-AS1Q96PY0 264 aa17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 OSBPL10Q9BXB5 764 aa17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 GABARAPL1Q9H0R8 117 aa17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 SEMA6AQ9H2E6 1030 aa17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 GALNT8Q9NY28 637 aa17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 UPB1Q9UBR1 384 aa17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 MAGED1Q9Y5V3 778 aaPredicted RBP17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 CDH10Q9Y6N8 788 aa17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 CACNA1CQ13936 2221 aa17.11■□□□□ 0.33
PCOLCE-208ENST00000487172 HELZ2Q9BYK8 2649 aaKnown RBP17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 PDLIM1O00151 329 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 IMPA2O14732 288 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 CLDN1O95832 211 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 TP53P04637 393 aaPredicted RBP17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 ACADSP16219 412 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 PSMB1P20618 241 aaKnown RBP17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 SLC6A6P31641 620 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 MELKQ14680 651 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 FAM205BPQ63HN1 556 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 GPR139Q6DWJ6 353 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 FAM122BQ7Z309 247 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 ABHD12BQ7Z5M8 362 aaPredicted RBP17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 IGFN1Q86VF2 1251 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 KIF18BQ86Y91 864 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 WDFY1Q8IWB7 410 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 ZNF566Q969W8 418 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 KATNB1Q9BVA0 655 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 HDHD5Q9BXW7 423 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 POLDIP3Q9BY77 421 aaKnown RBP17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 MRPL13Q9BYD1 178 aaKnown RBP17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 ZNF556Q9HAH1 456 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 ASB6Q9NWX5 421 aa17.1■□□□□ 0.33
PCOLCE-208ENST00000487172 RPL36A-HNRNPH2H7BZ11 118 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 ARPC3O15145 178 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 RRP9O43818 475 aaKnown RBP17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 UPK3AO75631 287 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 TXNDC12O95881 172 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 IGHV3-9P01782 118 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 PGA4P0DJD7 388 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 PGA3P0DJD8 388 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 COX5AP20674 150 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 PEX19P40855 299 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 DAPP51397 102 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 ELF3P78545 371 aaPredicted RBP17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 SORDQ00796 357 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 FAM27E3Q08E93 113 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 FAPQ12884 760 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 ITGADQ13349 1161 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 CAMK2DQ13557 499 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 KLHL17Q6TDP4 642 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 ZNF771Q7L3S4 317 aaPredicted RBP17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 UBE2J2Q8N2K1 259 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 ARIH2OSQ8N7S6 290 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 ATG16L2Q8NAA4 619 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 ACBD4Q8NC06 268 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 ZNF519Q8TB69 540 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 TMEM54Q969K7 222 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 SAMD8Q96LT4 415 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 TSPAN32Q96QS1 320 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 OR10A4Q9H209 315 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 EGLN3Q9H6Z9 239 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 NPDC1Q9NQX5 325 aaPredicted RBP17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 REV1Q9UBZ9 1251 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 OAZ3Q9UMX2 235 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 GPR52Q9Y2T5 361 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 DOPEY1Q5JWR5 2465 aa17.09■□□□□ 0.33
PCOLCE-208ENST00000487172 USP9XQ93008 2570 aaPredicted RBP17.08■□□□□ 0.33
PCOLCE-208ENST00000487172 A6NIZ1 184 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 TRMUO75648 421 aaKnown RBP17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 IGHG1P01857 330 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 OSMP13725 252 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 IGHV1-2P23083 117 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 SDHAP31040 664 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 ACVR1BP36896 505 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 CSNK1A1P48729 337 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 RPS6KA3P51812 740 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 RAP1BP61224 184 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 RAP1AP62834 184 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 ERVK-25P63136 954 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 STK11Q15831 433 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 HIST3H3Q16695 136 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 SFRP5Q5T4F7 317 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 STAC2Q6ZMT1 411 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 GPR137CQ8N3F9 429 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 ICA1LQ8NDH6 482 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 OR52L1Q8NGH7 329 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 KCNK17Q96T54 332 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 TAS2R16Q9NYV7 291 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 GRHPRQ9UBQ7 328 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 IL20RAQ9UHF4 553 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 POFUT2Q9Y2G5 429 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 ADAM18Q9Y3Q7 739 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 ALPK2Q86TB3 2170 aa17.08■□□□□ 0.32
PCOLCE-208ENST00000487172 FASNP49327 2511 aaKnown RBP17.07■□□□□ 0.32
PCOLCE-208ENST00000487172 PRSS44E7EML9 344 aa17.07■□□□□ 0.32
PCOLCE-208ENST00000487172 ZNF587BE7ETH6 402 aa17.07■□□□□ 0.32
PCOLCE-208ENST00000487172 C19orf84I3L1E1 186 aa17.07■□□□□ 0.32
PCOLCE-208ENST00000487172 IDH3BO43837 385 aa17.07■□□□□ 0.32
PCOLCE-208ENST00000487172 AHCYL1O43865 530 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms