RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 GSG1Q2KHT4 349 aa5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 CR1LQ2VPA4 569 aa5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 RUNDC3AQ59EK9 446 aa5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 RANBP3LQ86VV4 465 aaPredicted RBP5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 KTI12Q96EK9 354 aaPredicted RBP5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF607Q96SK3 696 aa5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 NUF2Q9BZD4 464 aa5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 BCL2L14Q9BZR8 327 aa5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 BPESC1Q9GZL8 116 aa5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 MMP24Q9Y5R2 645 aa5.35□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF503-AS2A6NEH8 195 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 CLIC1O00299 241 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 PGA4P0DJD7 388 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 PGA3P0DJD8 388 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 GRPRP30550 384 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 PCGF2P35227 344 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 GZMMP51124 257 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 CLDN17P56750 224 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 PUDPQ08623 228 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 ADRM1Q16186 407 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 HHATQ5VTY9 493 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 TMEM53Q6P2H8 277 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 CLEC4FQ8N1N0 589 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 VANGL1Q8TAA9 524 aaPredicted RBP5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 POP5Q969H6 163 aaKnown RBP5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 NOX3Q9HBY0 568 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 TMEM38BQ9NVV0 291 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 SLC25A37Q9NYZ2 338 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 GRIP1Q9Y3R0 1128 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 MMP7P09237 267 aaPredicted RBP5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 PRG2P13727 222 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 CD247P20963 164 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 AHCYP23526 432 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 CEACAM16Q2WEN9 425 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 PHYHD1Q5SRE7 291 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF621Q6ZSS3 439 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF584Q8IVC4 421 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 CDK20Q8IZL9 346 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 LRRC8CQ8TDW0 803 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 FOXN4Q96NZ1 517 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 ALG12Q9BV10 488 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 SUCNR1Q9BXA5 334 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 REV1Q9UBZ9 1251 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 KLHL21Q9UJP4 597 aa5.34□□□□□ -1.55
SMARCAD1-203ENST00000394961 M0R082 166 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 M0R233 179 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 UBDO15205 165 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 SERPINB7O75635 380 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 PNPP00491 289 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 MSMBP08118 114 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 GAAP10253 952 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 MRPS34P82930 218 aaKnown RBP5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 NPTX1Q15818 432 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF74Q16587 644 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF181Q2M3W8 571 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 KRT71Q3SY84 523 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 TMEM155Q4W5P6 130 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 UNQ6126/PRO20091Q6UXV3 157 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 PATL1Q86TB9 770 aaKnown RBP5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 MYPOPQ86VE0 399 aaPredicted RBP5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 FUNDC1Q8IVP5 155 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 NPEPL1Q8NDH3 523 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF417Q8TAU3 575 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 TMEM186Q96B77 213 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 RAB39BQ96DA2 213 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 DMRTB1Q96MA1 342 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF587Q96SQ5 575 aaPredicted RBP5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 FOXB1Q99853 325 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 SOX7Q9BT81 388 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 ZNF747Q9BV97 191 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 MRPL37Q9BZE1 423 aaKnown RBP5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 RABEP2Q9H5N1 569 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 MANSC1Q9H8J5 431 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 TMEM27Q9HBJ8 222 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 TMBIM4Q9HC24 238 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 ANGPT4Q9Y264 503 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 AP3M1Q9Y2T2 418 aa5.34□□□□□ -1.56
SMARCAD1-203ENST00000394961 CCDC168Q8NDH2 2452 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 NUP214P35658 2090 aaPredicted RBP5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 NCF2P19878 526 aaPredicted RBP5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 GTF2E2P29084 291 aaKnown RBP5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 BPIFB3P59826 476 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 RPL15P61313 204 aaKnown RBP5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 SLC3A1Q07837 685 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 OR1Q1Q15612 314 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 TRMT5Q32P41 509 aaKnown RBP5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 DLEU7Q6UYE1 221 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 OLIG3Q7RTU3 272 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 CALHM3Q86XJ0 350 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 SLC25A44Q96H78 314 aaPredicted RBP5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 DCLRE1CQ96SD1 692 aaKnown RBP5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 GLTPQ9NZD2 209 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 RPS6KB2Q9UBS0 482 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 POFUT2Q9Y2G5 429 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 USH1CQ9Y6N9 552 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 TLDC2A0PJX2 215 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 TRIM77I1YAP6 450 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 CYP7B1O75881 506 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 IGHV2-5P01817 119 aa5.33□□□□□ -1.56
SMARCAD1-203ENST00000394961 C1QCP02747 245 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms