RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 ASCC3Q8N3C0 2202 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 TET1Q8NFU7 2136 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 CHD3Q12873 2000 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 DOCK3Q8IZD9 2030 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SCN9AQ15858 1988 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 AK9Q5TCS8 1911 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 KIF20BQ96Q89 1820 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 COL4A2P08572 1712 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 NSD1Q96L73 2696 aaPredicted RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 PLIN4Q96Q06 1357 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 POLEQ07864 2286 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 BAZ2BQ9UIF8 2168 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 IGKV2-24A0A0C4DH68 120 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 ARHGEF37A1IGU5 675 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SAGE2PA6NJ88 616 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 E9PMD0 336 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SGK494L7N484 410 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SGK1O00141 431 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 STX6O43752 255 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SMPD2O60906 423 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 ADCY5O95622 1261 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 CSF3P09919 207 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 OR8U8P0C7N1 319 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 IFNAR1P17181 557 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 PTBP1P26599 531 aaKnown RBP eCLIP0.35□□□□□ -2.35
CEP290-208ENST00000604024 MAGEB1P43366 347 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 CRISP1P54107 249 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 C21orf59P57076 290 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 CCZ1BP86790 482 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 CCZ1P86791 482 aaPredicted RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 SMARCB1Q12824 385 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 CDC20Q12834 499 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SRSF6Q13247 344 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 CHRNA6Q15825 494 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SPIN3Q5JUX0 258 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 HECTD3Q5T447 861 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 IL23RQ5VWK5 629 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 TPGS2Q68CL5 300 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 PVRIGQ6DKI7 326 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 BTNL3Q6UXE8 466 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 HACD2Q6Y1H2 254 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 GDPD3Q7L5L3 318 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 GOLGA7Q7Z5G4 137 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 PCGF5Q86SE9 256 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 FAM133AQ8N9E0 248 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 OR7G3Q8NG95 312 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 PPTC7Q8NI37 304 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 M1APQ8TC57 530 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 ZNF418Q8TF45 676 aaPredicted RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 UBE2Q2Q8WVN8 375 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 ITLN2Q8WWU7 325 aaPredicted RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 RXFP2Q8WXD0 754 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 FGF13Q92913 245 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 TCEAL3Q969E4 200 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 ZNF707Q96C28 371 aaPredicted RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 OTUB2Q96DC9 234 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 ZNF396Q96N95 335 aaPredicted RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 HIST1H4GQ99525 98 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 DDX50Q9BQ39 737 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 NUP58Q9BVL2 599 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 TEKT3Q9BXF9 490 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 ABCG4Q9H172 646 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 TM9SF3Q9HD45 589 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 RGS18Q9NS28 235 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 HYPKQ9NX55 129 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 GHRLQ9UBU3 117 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 MTRF1LQ9UGC7 380 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 MAD2L2Q9UI95 211 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 PLLPQ9Y342 182 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SAMHD1Q9Y3Z3 626 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 PTPRBP23467 1997 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 ROS1P08922 2347 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 UTP20O75691 2785 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 PCDH15Q96QU1 1955 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 PTPRFP10586 1907 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 LOXHD1Q8IVV2 1947 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 CCDC171Q6TFL3 1326 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 A0A0G2JN53 185 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SLC5A10A0PJK1 596 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 C7orf66A4D0T2 115 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 C5orf63A6NC05 138 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 C16orf90A8MZG2 172 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 C21orf140B9A014 251 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 G3V4G9 280 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 DDX39AO00148 427 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 SLC28A1O00337 649 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 TIMM44O43615 452 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 KIAA0754O94854 1291 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 TNFSF15O95150 251 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 VAMP5O95183 116 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 TGDSO95455 350 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 TGM6O95932 706 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 SLC35G4P0C7Q5 338 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 RBMY1A1P0DJD3 496 aaKnown RBP0.35□□□□□ -2.35
CEP290-208ENST00000604024 TCN2P20062 427 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 DNAJB1P25685 340 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 CA7P43166 264 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 NMUP48645 174 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 NPY2RP49146 381 aa0.35□□□□□ -2.35
CEP290-208ENST00000604024 CRISP3P54108 245 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms