RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TUBA1BP68363 451 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 TUBA4AP68366 448 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 TRMT5Q32P41 509 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 ALG10BQ5I7T1 473 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 RPS26P11Q5JNZ5 115 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 REEP3Q6NUK4 255 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 TUBA1AQ71U36 451 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 C20orf196Q8IYI0 205 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 TMEM123Q8N131 208 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 SVOPLQ8N434 492 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 ANKRD42Q8N9B4 389 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 ZNF417Q8TAU3 575 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 ZNF587Q96SQ5 575 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 ASPNQ9BXN1 380 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 TMEM27Q9HBJ8 222 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 B3GNT2Q9NY97 397 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 NKIRAS1Q9NYS0 192 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 RAB21Q9UL25 225 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 POFUT2Q9Y2G5 429 aa15.4■□□□□ 0.06
SHKBP1-227ENST00000602011 A0A1B0GWA3 101 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 TMEM120BA0PK00 339 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF726A6NNF4 738 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 B4DSR2 109 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 SERPINB7O75635 380 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 NQO1P15559 274 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 CAPZA2P47755 286 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 CDH15P55291 814 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 TMEM33P57088 247 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 STX1BP61266 288 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 MRPS11P82912 194 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 NPRL3Q12980 569 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 SNTB2Q13425 540 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 GSG1Q2KHT4 349 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 SWT1Q5T5J6 900 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 PXKQ7Z7A4 578 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 MDP1Q86V88 176 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 TEX29Q8N6K0 151 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 MRPL24Q96A35 216 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF607Q96SK3 696 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 PAIP1Q9H074 479 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 NOX3Q9HBY0 568 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 TESQ9UGI8 421 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 SLC13A4Q9UKG4 626 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 CORO2BQ9UQ03 480 aa15.39■□□□□ 0.05
SHKBP1-227ENST00000602011 A0A087WUJ7 227 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 MS4A18H0YCH9 400 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 TRAF3IP2O43734 574 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 TGDSO95455 350 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 VIMP08670 466 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 ADRA2AP08913 450 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 LSP1P33241 339 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 NCALDP61601 193 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 IL1RL1Q01638 556 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 MS4A18Q3C1V0 323 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 MMEL1Q495T6 779 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 ZFAND2BQ8WV99 257 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 VPS33AQ96AX1 596 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 MRPL39Q9NYK5 338 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 KLHL14Q9P2G3 628 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 REV1Q9UBZ9 1251 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 GPR160Q9UJ42 338 aa15.38■□□□□ 0.05
SHKBP1-227ENST00000602011 LRP5LA4QPB2 252 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 M0R233 179 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 M0R3G1 203 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 MT-ATP6P00846 226 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 CELA3BP08861 270 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 NUDT7P0C024 238 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 ARAFP10398 606 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF35P13682 527 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 HOXC5Q00444 222 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 CDK6Q00534 326 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 GALK2Q01415 458 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 PMS2P3Q13401 168 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 GTDC1Q4AE62 458 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 LRIF1Q5T3J3 769 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 GCNT6Q5T4J0 391 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF813Q6ZN06 617 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 DEF8Q6ZN54 512 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 PIWIL3Q7Z3Z3 882 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 MGARPQ8TDB4 240 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 MAL2Q969L2 176 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 SOX7Q9BT81 388 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 TMEM43Q9BTV4 400 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 TMEM38AQ9H6F2 299 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 SEC61A2Q9H9S3 476 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 METRNQ9UJH8 293 aa15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 ZNF346Q9UL40 294 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-227ENST00000602011 SLC22A23A1A5C7 686 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 SH3PXD2BA1X283 911 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 EVPLLA8MZ36 301 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 MGRN1O60291 552 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 UBL3O95164 117 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 CD79AP11912 226 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 ACHEP22303 614 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 SLC6A2P23975 617 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 SELENOVP59797 346 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 PUDPQ08623 228 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 KRT80Q6KB66 452 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 EPGNQ6UW88 154 aa15.36■□□□□ 0.05
SHKBP1-227ENST00000602011 DPPA2Q7Z7J5 298 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms