RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ACVR1BP36896 505 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 CDKN2AP42771 156 aaKnown RBP12.41□□□□□ -0.42
TPM1-215ENST00000558868 BLVRAP53004 296 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 TUBA1BP68363 451 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 BDH1Q02338 343 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 HSF2Q03933 536 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 MYBPHQ13203 477 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 TPBGQ13641 420 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 GALEQ14376 348 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 RTP5Q14D33 572 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 ACKR1Q16570 336 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 C19orf48Q6RUI8 117 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 PAQR6Q6TCH4 344 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 TUBA1AQ71U36 451 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 MDGA2Q7Z553 956 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 LHFPL3Q86UP9 236 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 MARCH9Q86YJ5 346 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 KBTBD8Q8NFY9 601 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 OR10H4Q8NGA5 316 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 OR2T27Q8NH04 317 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 UFD1Q92890 307 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 ARL5BQ96KC2 179 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 GNRHR2Q96P88 292 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 NPAS1Q99742 590 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 ARHGAP9Q9BRR9 750 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 DCUN1D5Q9BTE7 237 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 PCNX3Q9H6A9 2034 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 ADGRL4Q9HBW9 690 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 FANCFQ9NPI8 374 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 ASB6Q9NWX5 421 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 DLL3Q9NYJ7 618 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 A0A1W2PNV4 684 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 SHISA8B8ZZ34 492 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 NPIPA5E9PKD4 350 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 ARHGEF9O43307 516 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 AHCYL1O43865 530 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 EFNA2O43921 213 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 MT-ND5P03915 603 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 GYPBP06028 91 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 CLUP10909 449 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 CPEP16870 476 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 GADD45AP24522 165 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 CD96P40200 585 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 SOX8P57073 446 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 OR2B6P58173 313 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 TAS2R43P59537 309 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 ACTA2P62736 377 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 ACTG2P63267 376 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 SLC35A1P78382 337 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 MESTQ5EB52 335 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 RAET1LQ5VY80 246 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 TUBA3EQ6PEY2 450 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 ZNF322Q6U7Q0 402 aaPredicted RBP12.4□□□□□ -0.42
TPM1-215ENST00000558868 USP43Q70EL4 1123 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 HDDC2Q7Z4H3 204 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 PXKQ7Z7A4 578 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 LSRQ86X29 649 aaPredicted RBP12.4□□□□□ -0.42
TPM1-215ENST00000558868 EGFL6Q8IUX8 553 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 TMEM99Q8N816 258 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 ZNF519Q8TB69 540 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 KCNE4Q8WWG9 221 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 GATAD2BQ8WXI9 593 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 ZMYND19Q96E35 227 aaPredicted RBP12.4□□□□□ -0.42
TPM1-215ENST00000558868 OR5B2Q96R09 309 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 MNTQ99583 582 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 FAM173AQ9BQD7 235 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 ALG8Q9BVK2 526 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 RPRD1BQ9NQG5 326 aaKnown RBP12.4□□□□□ -0.42
TPM1-215ENST00000558868 NDUFB11Q9NX14 153 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 ANKRD10Q9NXR5 420 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 NPIPA1Q9UND3 350 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 FKBP7Q9Y680 259 aa12.4□□□□□ -0.42
TPM1-215ENST00000558868 PRSS37A4D1T9 235 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 G3V3Y1 287 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 MS4A18H0YCH9 400 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 LINC01387J3KSC0 135 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 ZIC3O60481 467 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 EIF1BO60739 113 aaKnown RBP12.39□□□□□ -0.43
TPM1-215ENST00000558868 PMS2P2O95744 297 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 IL11P20809 199 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 NR4A1P22736 598 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 PAX7P23759 505 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 SERPINB10P48595 397 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 DNASE1L1P49184 302 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 RAC1P63000 192 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 CSNK2A1P68400 391 aaPredicted RBP12.39□□□□□ -0.43
TPM1-215ENST00000558868 AQP6Q13520 282 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 GPR50Q13585 617 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 SPCS2Q15005 226 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 SSX1Q16384 188 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 ZNF239Q16600 458 aaKnown RBP12.39□□□□□ -0.43
TPM1-215ENST00000558868 DGUOKQ16854 277 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 MS4A18Q3C1V0 323 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 TMEM176BQ3YBM2 270 aaPredicted RBP12.39□□□□□ -0.43
TPM1-215ENST00000558868 OR2G6Q5TZ20 316 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 AGAP7PQ5VUJ5 663 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 DNM1P34Q6PK57 102 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 TMPPEQ6ZT21 453 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 ATCAYQ86WG3 371 aa12.39□□□□□ -0.43
TPM1-215ENST00000558868 PHC2Q8IXK0 858 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms