RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 CAMK2AQ9UQM7 478 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 RASD1Q9Y272 281 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 ADAM18Q9Y3Q7 739 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 NOX1Q9Y5S8 564 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 CDH10Q9Y6N8 788 aa5.3□□□□□ -1.56
USP39-213ENST00000467885 TNRC6AQ8NDV7 1962 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 CACNA1GO43497 2377 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 BOD1L1Q8NFC6 3051 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 ACACBO00763 2458 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 IGKV3D-15A0A087WSY6 115 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 OR6C68A6NDL8 312 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 NPIPB13A6NJU9 1138 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 CD8B2A6NJW9 211 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 CLCA1A8K7I4 914 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 NPIPB4C9JG80 1138 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 C11orf98E9PRG8 122 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 H3BN98 237 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 BCKDKO14874 412 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 SURF4O15260 269 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 ATXN7O15265 892 aaPredicted RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 RNF13O43567 381 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 TRAF3IP2O43734 574 aaPredicted RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 TLX2O43763 284 aaPredicted RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 PRKYO43930 277 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 WBP4O75554 376 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 ZNF432O94892 652 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 TOXO94900 526 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 OR6A2O95222 327 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 PPP1R3DO95685 299 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 YES1P07947 543 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 HOXD4P09016 255 aaPredicted RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 IFNGR1P15260 489 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 HIST1H1CP16403 213 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 MYF6P23409 242 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 SLC6A6P31641 620 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 GRK5P34947 590 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 RPL4P36578 427 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 RPS6KA3P51812 740 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 SMSP52788 366 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 SLC16A1P53985 500 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 NUP107P57740 925 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 RPS3AP61247 264 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 RPL27P61353 136 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 SNRPGP62308 76 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 PUDPQ08623 228 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 CD47Q08722 323 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 RASGEF1BQ0VAM2 473 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 DBPQ10586 325 aaPredicted RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 ITGADQ13349 1161 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 IL18R1Q13478 541 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 KEAP1Q14145 624 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 PON3Q15166 354 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 POU4F3Q15319 338 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 ACKR1Q16570 336 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 OCLNQ16625 522 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 HIST3H3Q16695 136 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 CLEC12AQ5QGZ9 265 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 WLSQ5T9L3 541 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 AADACL4Q5VUY2 407 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 ZNF691Q5VV52 312 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 NSUN5P2Q63ZY6 315 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 RPL13AP3Q6NVV1 102 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 SLC27A4Q6P1M0 643 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 PTCHD4Q6ZW05 846 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 SLC35D2Q76EJ3 337 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 FCRLAQ7L513 359 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 BCDIN3DQ7Z5W3 292 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 PM20D2Q8IYS1 436 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 ENTHD1Q8IYW4 607 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 DEPDC4Q8N2C3 294 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 TCEANCQ8N8B7 351 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 OR2T33Q8NG76 320 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 OR9K2Q8NGE7 335 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 OR52E2Q8NGJ4 325 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 ZNF519Q8TB69 540 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 FNDC9Q8TBE3 224 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 FAM57AQ8TBR7 257 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 CYGBQ8WWM9 190 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 CPNE4Q96A23 557 aaPredicted RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 NMD3Q96D46 503 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 ZNF570Q96NI8 536 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 ERMAPQ96PL5 475 aaPredicted RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 ZNF385AQ96PM9 386 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 EMC6Q9BV81 110 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 KATNB1Q9BVA0 655 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 IFT27Q9BW83 186 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 POLDIP3Q9BY77 421 aaKnown RBP5.29□□□□□ -1.56
USP39-213ENST00000467885 ANKRD60Q9BZ19 345 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 NMNAT2Q9BZQ4 307 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 KLHL13Q9P2N7 655 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 BAIAP2Q9UQB8 552 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 RNF6Q9Y252 685 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 ORC6Q9Y5N6 252 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 GMPPBQ9Y5P6 360 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 HSPE1-MOB4S4R3N1 261 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 EXPH5Q8NEV8 1989 aa5.29□□□□□ -1.56
USP39-213ENST00000467885 A0A1W2PNV4 684 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 SLC22A23A1A5C7 686 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 ZNF724A8MTY0 619 aa5.28□□□□□ -1.56
USP39-213ENST00000467885 DCTN6O00399 190 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms