RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 KELP23276 732 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 AHCYP23526 432 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 DDX6P26196 483 aaKnown RBP eCLIP3.13□□□□□ -1.91
SORT1-202ENST00000466471 RPL9P32969 192 aaKnown RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 S100A3P33764 101 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 BTCP35070 178 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 RORAP35398 523 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 MNDAP41218 407 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 FOLR3P41439 243 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 BDKRB1P46663 353 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 GPR12P47775 334 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 UQCRFS1P47985 274 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 HTR6P50406 440 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ARFIP1P53367 373 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 NUDT6P53370 316 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CLDN6P56747 220 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 POLR2GP62487 172 aaKnown RBP eCLIP3.13□□□□□ -1.91
SORT1-202ENST00000466471 DCDP81605 110 aaKnown RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 CDK5Q00535 292 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 IL1RL1Q01638 556 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ZNF91Q05481 1191 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 RAB40BQ12829 278 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 MRPL28Q13084 256 aaKnown RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 RPA4Q13156 261 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 TP53BP2Q13625 1128 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 EXOSC2Q13868 293 aaKnown RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 PTPRCAPQ14761 206 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ZNF169Q14929 603 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 PTGES3Q15185 160 aaKnown RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 SNAPC1Q16533 368 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 GUCA2BQ16661 112 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 NDUFA9Q16795 377 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 TMEM44Q2T9K0 475 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 WSCD2Q2TBF2 565 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SLC36A2Q495M3 483 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 GPR33Q49SQ1 333 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CTSL3PQ5NE16 218 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ELFN2Q5R3F8 820 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CLVS2Q5SYC1 327 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 C10orf91Q5T1B1 145 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 HES3Q5TGS1 186 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ANXA8L1Q5VT79 327 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 LYPLAL1Q5VWZ2 237 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 TCTN3Q6NUS6 607 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 NOTUMQ6P988 496 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 GLB1LQ6UWU2 654 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 LINGO4Q6UY18 593 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 GCNT7Q6ZNI0 430 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 PLEKHM3Q6ZWE6 761 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 LRRC70Q7Z2Q7 622 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 OAFQ86UD1 273 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 TBC1D26Q86UD7 250 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 TAC4Q86UU9 113 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 COMMD7Q86VX2 200 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 UEVLDQ8IX04 471 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CDH26Q8IXH8 852 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ZDHHC23Q8IYP9 409 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 Q8N402 240 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 MS4A15Q8N5U1 240 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SLC5A8Q8N695 610 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 EID2Q8N6I1 236 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 LRRC17Q8N6Y2 441 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 C19orf18Q8NEA5 215 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 TSTD1Q8NFU3 115 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 OR11H4Q8NGC9 324 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 OR4K2Q8NGD2 314 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 OR9Q1Q8NGQ5 310 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ZNF431Q8TF32 576 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 SMARCD2Q92925 531 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 EXTL1Q92935 676 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 MARC2Q969Z3 335 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 MYLPFQ96A32 169 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 MYEOVQ96EZ4 313 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ELMOD3Q96FG2 381 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SMARCD1Q96GM5 515 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SENP5Q96HI0 755 aaPredicted RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 DIRAS2Q96HU8 199 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 C8orf49Q96NF6 230 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ATF6BQ99941 703 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 FAM110AQ9BQ89 295 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ACBD6Q9BR61 282 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SRSF8Q9BRL6 282 aaKnown RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 SEC22CQ9BRL7 303 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 RTN4RQ9BZR6 473 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SLC19A3Q9BZV2 496 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 PLEKHA1Q9HB21 404 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ASCL3Q9NQ33 180 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 SERTAD4Q9NUC0 356 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 EXD2Q9NVH0 621 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 CLN6Q9NWW5 311 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 DDIT4Q9NX09 232 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ARL15Q9NXU5 204 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 COA4Q9NYJ1 87 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 GPR83Q9NYM4 423 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 ATP6V1HQ9UI12 483 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 TEKT2Q9UIF3 430 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 PURGQ9UJV8 347 aaKnown RBP3.13□□□□□ -1.91
SORT1-202ENST00000466471 PLAGL1Q9UM63 463 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 MGAT4BQ9UQ53 548 aa3.13□□□□□ -1.91
SORT1-202ENST00000466471 EXOGQ9Y2C4 368 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms