RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 DEFB113Q30KQ7 82 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 TMEM108Q6UXF1 575 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 NKAIN4Q8IVV8 208 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 SGTBQ96EQ0 304 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 RADILQ96JH8 1075 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 HSH2DQ96JZ2 352 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 ALKBH3Q96Q83 286 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-213ENST00000460211 PRSS27Q9BQR3 290 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 TMEM204Q9BSN7 226 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 OBP2BQ9NPH6 170 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 SLC17A5Q9NRA2 495 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 BEX4Q9NWD9 120 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-213ENST00000460211 EGFL7Q9UHF1 273 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 SAMD4AQ9UPU9 718 aaKnown RBP13.12□□□□□ -0.31
ATG4B-213ENST00000460211 MGAT4BQ9UQ53 548 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 FAM32AQ9Y421 112 aaKnown RBP13.12□□□□□ -0.31
ATG4B-213ENST00000460211 SLC25A15Q9Y619 301 aa13.12□□□□□ -0.31
ATG4B-213ENST00000460211 FBN3Q75N90 2809 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 DPRXA6NFQ7 191 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 C11orf98E9PRG8 122 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 HS3ST1O14792 307 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 RNF13O43567 381 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 SERPINI2O75830 405 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 HPRP00739 348 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 HOXB1P14653 301 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-213ENST00000460211 NCK1P16333 377 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 CD53P19397 219 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 FUT1P19526 365 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 SLC25A3Q00325 362 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 BSPH1Q075Z2 132 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 TRAM2Q15035 370 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 SPATS1Q496A3 300 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 ADAM5Q6NVV9 412 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 NANOGNBQ7Z5D8 188 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 BIVMQ86UB2 503 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 DEPDC4Q8N2C3 294 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 RNF148Q8N7C7 305 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 OR6N1Q8NGY5 312 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 TMEM255BQ8WV15 326 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 AKAP1Q92667 903 aaKnown RBP eCLIP13.11□□□□□ -0.31
ATG4B-213ENST00000460211 BOD1Q96IK1 185 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 NSL1Q96IY1 281 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 LRR1Q96L50 414 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 ADAD1Q96M93 576 aaKnown RBP13.11□□□□□ -0.31
ATG4B-213ENST00000460211 OR2M2Q96R28 347 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 CDRT15Q96T59 188 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 CCL19Q99731 98 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 PIP5K1AQ99755 562 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 MOV10Q9HCE1 1003 aaKnown RBP13.11□□□□□ -0.31
ATG4B-213ENST00000460211 MEPEQ9NQ76 525 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-213ENST00000460211 MAGEL2Q9UJ55 1249 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 ADAM21Q9UKJ8 722 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 A4GNTQ9UNA3 340 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 PRR14LQ5THK1 2151 aa13.11□□□□□ -0.31
ATG4B-213ENST00000460211 A0A1W2PR80 420 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 SLC35F4A4IF30 521 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 BLOC1S5-TXNDC5H3BN57 136 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 RPL36A-HNRNPH2H7BZ11 118 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 OR7A10O76100 309 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 PLAUP00749 431 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 ASAH2BP0C7U1 165 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 HLA-DOBP13765 273 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 HSD17B1P14061 328 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 TCN1P20061 433 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-213ENST00000460211 YAP1P46937 504 aaKnown RBP13.1□□□□□ -0.31
ATG4B-213ENST00000460211 ZNF83P51522 516 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 UGT2B15P54855 530 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 LGALS3BPQ08380 585 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 CARD17Q5XLA6 110 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 ANKRD16Q6P6B7 361 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 SLC35D2Q76EJ3 337 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 RRM2BQ7LG56 351 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 CDK20Q8IZL9 346 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 DEFB107AQ8IZN7 70 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 OFCC1Q8IZS5 231 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 FITM2Q8N6M3 262 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 LRRC17Q8N6Y2 441 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 ZNF611Q8N823 705 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 WDR31Q8NA23 367 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 OR1K1Q8NGR3 316 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 TXNDC15Q96J42 360 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 EMC6Q9BV81 110 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 GORASP2Q9H8Y8 452 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 GPR35Q9HC97 309 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 DCAF13Q9NV06 445 aaKnown RBP13.1□□□□□ -0.31
ATG4B-213ENST00000460211 MED29Q9NX70 200 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 TAS2R5Q9NYW4 299 aa13.1□□□□□ -0.31
ATG4B-213ENST00000460211 A0A1W2PRG6 482 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 B2RBV5 119 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 M0R1B8 84 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 M0R3G1 203 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 ABCD4O14678 606 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 SMPD2O60906 423 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 TMCC2O75069 709 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 BCL10O95999 233 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 IFNGR1P15260 489 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 CEACAM16Q2WEN9 425 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 TBRG1Q3YBR2 411 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 SEZ6L2Q6UXD5 910 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 CLEC9AQ6UXN8 241 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms