RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 IMPA2O14732 288 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 KRT6BP04259 564 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 ANXA4P09525 319 aaPredicted RBP4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 SLC35G4P0C7Q5 338 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 GNPDA1P46926 289 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 KRT6CP48668 564 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 CSNK1DP48730 415 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 KLK7P49862 253 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 SLC7A2P52569 658 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 PPIAP62937 165 aaKnown RBP4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 ACY1Q03154 408 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 RAD51Q06609 339 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 PAX8Q06710 450 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 PRR30Q53SZ7 412 aaPredicted RBP4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 RIPPLY2Q5TAB7 128 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 DMKNQ6E0U4 476 aaPredicted RBP4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 STRADAQ7RTN6 431 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF573Q86YE8 665 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 HSCBQ8IWL3 235 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 PHC2Q8IXK0 858 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 NPWQ8N729 165 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 SLC37A2Q8TED4 501 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 FAM172AQ8WUF8 416 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 DLX4Q92988 240 aaPredicted RBP4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 CARD6Q9BX69 1037 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 GPN2Q9H9Y4 310 aaPredicted RBP4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 FBXO8Q9NRD0 319 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 FAM114A2Q9NRY5 505 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 CIDEBQ9UHD4 219 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 ATP6V1HQ9UI12 483 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 RWDD2AQ9UIY3 292 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 HPCAL4Q9UM19 191 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 DNHD1Q96M86 4753 aa4.48□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZFC3H1O60293 1989 aaKnown RBP4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 APCP25054 2843 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 TRPM6Q9BX84 2022 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 TCP11X1B4DZS4 312 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 F8VZ95 297 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 H3BTX0 84 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PDE5AO76074 875 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 TOXO94900 526 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 LSM8O95777 96 aaKnown RBP4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 GOT2P00505 430 aaKnown RBP4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 IVLP07476 585 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 CALCBP10092 127 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 UCHL3P15374 230 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 TCN2P20062 427 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 DPP4P27487 766 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PPP2R1BP30154 601 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 SDC4P31431 198 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 ACTR1BP42025 376 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PTGFRP43088 359 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 HTR5AP47898 357 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 GFERP55789 205 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 ACTR1AP61163 376 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 TRA2BP62995 288 aaKnown RBP4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF85Q03923 595 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 SLC10A7Q0GE19 358 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZP4Q12836 540 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 BNIP1Q12981 228 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 RAPSNQ13702 412 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 EXOSC2Q13868 293 aaKnown RBP4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 CD226Q15762 336 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PCK2Q16822 640 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PARP15Q460N3 678 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 NADK2Q4G0N4 442 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PYCR3Q53H96 274 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 HSP90AA4PQ58FG1 418 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 FAM182AQ5T1J6 154 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 C9orf66Q5T8R8 295 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 LEG1Q6P5S2 330 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 EMBQ6PCB8 327 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 WDR74Q6RFH5 385 aaPredicted RBP4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 APOOLQ6UXV4 268 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF562Q6V9R5 426 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 KRTAP7-1Q8IUC3 87 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 GCNT2Q8N0V5 402 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 ABHD12Q8N2K0 398 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 Q8N377 158 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 NFAM1Q8NET5 270 aaPredicted RBP4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 OR52J3Q8NH60 311 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PINX1Q96BK5 328 aaKnown RBP4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 NTNG2Q96CW9 530 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 COX14Q96I36 57 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PEBP4Q96S96 227 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 VGLL1Q99990 258 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 C11orf70Q9BRQ4 267 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 ZNF416Q9BWM5 594 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 TBC1D10AQ9BXI6 508 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 GSDMCQ9BYG8 508 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 TSPY26PQ9H489 355 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 ETNK2Q9NVF9 386 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PPIL1Q9Y3C6 166 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 HIVEP1P15822 2718 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 PDZD2O15018 2839 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 MYH10P35580 1976 aa4.47□□□□□ -1.69
RNU4-39P-201ENST00000362455 SDK2Q58EX2 2172 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 TDRD6O60522 2096 aaKnown RBP4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 IGHV3-16A0A0C4DH30 117 aa4.46□□□□□ -1.7
RNU4-39P-201ENST00000362455 FBLL1A6NHQ2 334 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms