RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 RETREG3Q86VR2 466 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 PTOV1Q86YD1 416 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 HIPK1Q86Z02 1210 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 RBM45Q8IUH3 476 aaKnown RBP9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 TMEM123Q8N131 208 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 GPR137CQ8N3F9 429 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 ARIH2OSQ8N7S6 290 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 LSMEM1Q8N8F7 131 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 SLC38A4Q969I6 547 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 SLC35B4Q969S0 331 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 MOGAT1Q96PD6 335 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 VRK1Q99986 396 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 CRLF2Q9HC73 371 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 MED29Q9NX70 200 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 CRNNQ9UBG3 495 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 PMF1-BGLAPU3KQ54 211 aa9.66□□□□□ -0.86
PPP4R1-218ENST00000580745 A0A087WUJ7 227 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 A0A0B4J2E0 115 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 A0A1B0GX12 115 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 RPL36A-HNRNPH2H7BZ11 118 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 MFN2O95140 757 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 IGLV1-44P01699 117 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 CRYAAP02489 173 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 IGHV4-31P0DP07 118 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 NQO1P15559 274 aaKnown RBP9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 SLC25A16P16260 332 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 GPX2P18283 190 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 SLC6A2P23975 617 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 THBS4P35443 961 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 CAPZA2P47755 286 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 MTPNP58546 118 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 DSCR9P59020 149 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 VLDLRP98155 873 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 NPRL3Q12980 569 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 GGTLC2Q14390 218 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 SQLEQ14534 574 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 NPTX1Q15818 432 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 RUNDC3AQ59EK9 446 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 ULK3Q6PHR2 472 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 NHLRC1Q6VVB1 395 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 SLC46A3Q7Z3Q1 461 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 TSPYL5Q86VY4 417 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 KRT73Q86Y46 540 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 ARMC8Q8IUR7 673 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 UEVLDQ8IX04 471 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 C10orf53Q8N6V4 93 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 GPR32P1Q8NGA4 272 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 OR4D11Q8NGI4 311 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 MAGEE2Q8TD90 523 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 DNAJA4Q8WW22 397 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 DYDC1Q8WWB3 177 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 FOXN4Q96NZ1 517 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 KCNS3Q9BQ31 491 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 KATNB1Q9BVA0 655 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 TMEM38AQ9H6F2 299 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 C12orf10Q9HB07 376 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 TMEM27Q9HBJ8 222 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 OBP2BQ9NPH6 170 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 PRDM4Q9UKN5 801 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 RCE1Q9Y256 329 aa9.65□□□□□ -0.86
PPP4R1-218ENST00000580745 FBN1P35555 2871 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 IGHV2OR16-5A0A0B4J2B6 119 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 IGHV4-61A0A0C4DH41 118 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 SLC35F4A4IF30 521 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 OR6C65A6NJZ3 312 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 EVPLLA8MZ36 301 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 VWC2LB2RUY7 222 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 M0QX08 132 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 OR2T1O43869 369 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 LYPD3O95274 346 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 IGKV3-15P01624 115 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 HLA-HP01893 362 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 THY1P04216 161 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 IGFBP1P08833 259 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 CBR1P16152 277 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 USF1P22415 310 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 PPIBP23284 216 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 PDLIM4P50479 330 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 ATP4BP51164 291 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 NCALDP61601 193 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 SNRPD2P62316 118 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 SRSF2Q01130 221 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 POU3F1Q03052 451 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 PIGFQ07326 219 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 SF3A3Q12874 501 aaKnown RBP eCLIP9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 CAMK2DQ13557 499 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 DUSP7Q16829 419 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 MSMPQ1L6U9 139 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 CHRFAM7AQ494W8 412 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 KRT80Q6KB66 452 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 WDR88Q6ZMY6 472 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 IL17RELQ6ZVW7 336 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 DHDDSQ86SQ9 333 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 C20orf196Q8IYI0 205 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 SVOPLQ8N434 492 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 HIPK4Q8NE63 616 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 VANGL1Q8TAA9 524 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 SLC47A1Q96FL8 570 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 SLC41A3Q96GZ6 507 aa9.64□□□□□ -0.87
PPP4R1-218ENST00000580745 MS4A3Q96HJ5 214 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms