RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 DEFB127Q9H1M4 99 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 MMP27Q9H306 513 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZNF385DQ9H6B1 395 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RMND5AQ9H871 391 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SLC52A3Q9NQ40 469 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TPSG1Q9NRR2 321 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 EXD2Q9NVH0 621 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 FLRT3Q9NZU0 649 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PPP4R1LQ9P1A2 415 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SPRR3Q9UBC9 169 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TINAGQ9UJW2 476 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PRDM4Q9UKN5 801 aa4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 KLF2Q9Y5W3 355 aaPredicted RBP4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 USP9XQ93008 2570 aaPredicted RBP4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 GCN1Q92616 2671 aaKnown RBP4.18□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PTPN13Q12923 2485 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 NCOA6Q14686 2063 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 A0A096LPI6 279 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 C9orf118A6NHY6 69 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CD8B2A6NJW9 211 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 AHRRA9YTQ3 701 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 B4DXG7 233 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 NPIPA2E9PIF3 369 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 NPIPA3F8WFD2 350 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 H3BNH8 94 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ETV2O00321 342 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SLC33A1O00400 549 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 HMGN4O00479 90 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CCL21O00585 134 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 WIPF1O43516 503 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SPRY2O43597 315 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SCO2O43819 266 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 KIAA0513O60268 411 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZIC3O60481 467 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZG16O60844 167 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 STX11O75558 287 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PDE9AO76083 593 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CPSF4O95639 269 aaKnown RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 KRT75O95678 551 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ANGPTL1O95841 491 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RNASE1P07998 156 aaKnown RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RNF224P0DH78 156 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TROVE2P10155 538 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 GP1BBP13224 206 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CPN1P15169 458 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZNF17P17021 662 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CCNA2P20248 432 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PPIBP23284 216 aaKnown RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DPP4P27487 766 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 MC5RP33032 325 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CHI3L1P36222 383 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DCTP40126 519 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 MDH1P40925 334 aaKnown RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 LUMP51884 338 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ATP12AP54707 1039 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 DLX5P56178 289 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 B3GALT5-AS1P59052 145 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 FUT5Q11128 374 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 FADDQ13158 208 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RNPS1Q15287 305 aaKnown RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZNF141Q15928 474 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 KLHL26Q53HC5 615 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 EIPR1Q53HC9 387 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 IGSF11Q5DX21 431 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 LRIF1Q5T3J3 769 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 C1orf185Q5T7R7 199 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RIPPLY2Q5TAB7 128 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PRAMEF8Q5VWM4 474 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 PRAMEF7Q5VXH5 474 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 RTL6Q6ICC9 239 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 AAGABQ6PD74 315 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ENPP6Q6UWR7 440 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 APOOLQ6UXV4 268 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 MARCH3Q86UD3 253 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 IFNEQ86WN2 208 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 FUNDC1Q8IVP5 155 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TIGD4Q8IY51 512 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 GTPBP8Q8N3Z3 284 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ACBD4Q8NC06 268 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 FAM71CQ8NEG0 241 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OR5D16Q8NGK9 328 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OR10S1Q8NGN2 331 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OR9I1Q8NGQ6 314 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OR4C3Q8NH37 302 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 OR5AK3PQ8NH89 298 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZPLD1Q8TCW7 415 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZFP90Q8TF47 636 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ASB5Q8WWX0 329 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 GTF2H4Q92759 462 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ABTB1Q969K4 478 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 SPDL1Q96EA4 605 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 CHMP6Q96FZ7 201 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 KIRREL1Q96J84 757 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 MARK4Q96L34 752 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TMEM68Q96MH6 324 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 HS6ST2Q96MM7 605 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZFP3Q96NJ6 502 aa4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 ZNF317Q96PQ6 595 aaPredicted RBP4.17□□□□□ -1.74
RNU6ATAC28P-201ENST00000459249 TRNT1Q96Q11 434 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms