RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 PRR14Q9BWN1 585 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 CHODLQ9H9P2 273 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 NANOGQ9H9S0 305 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 NDE1Q9NXR1 346 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 P2RX2Q9UBL9 471 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 MEGF8Q7Z7M0 2845 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 CENPVL1A0A0U1RR11 272 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 LOC100289279A0A1B0GTE1 492 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 ZNF716A6NP11 495 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 C5orf58C9J3I9 102 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 ZNF264O43296 627 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 GPX2P18283 190 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 GZMKP49863 264 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 MVDP53602 400 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 SESN3P58005 492 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 GNA13Q14344 377 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 GABRA6Q16445 453 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 CYP51A1Q16850 503 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 ARHGAP11BQ3KRB8 267 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 GCNT6Q5T4J0 391 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 C3orf33Q6P1S2 294 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 KLHL17Q6TDP4 642 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 ZNF614Q8N883 585 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 TOR1AIP2Q8NFQ8 470 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 AP3M1Q9Y2T2 418 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 GMEB1Q9Y692 573 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 ATP23Q9Y6H3 246 aa14.41□□□□□ -0.1
SHKBP1-215ENST00000597649 B2RBV5 119 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 FXYD1O00168 92 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 SULT2B1O00204 365 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 STX11O75558 287 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 ITGA5P08648 1049 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 UBL4AP11441 157 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 CCR4P51679 360 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 PSME3P61289 254 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 SLC25A3Q00325 362 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 SKP2Q13309 424 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 CBFBQ13951 182 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 SELPLGQ14242 412 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 GGTLC2Q14390 218 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 PDK3Q15120 406 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 RABL3Q5HYI8 236 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 PDZK1Q5T2W1 519 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 FAM166AQ6J272 317 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 C16orf89Q6UX73 402 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 OLIG3Q7RTU3 272 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 TMCO5AQ8N6Q1 288 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 OR52E4Q8NGH9 312 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 APH1AQ96BI3 265 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 DNAJA3Q96EY1 480 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 SDF2Q99470 211 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 LAT2Q9GZY6 243 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 ACER3Q9NUN7 267 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 ASB6Q9NWX5 421 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 CALML5Q9NZT1 146 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 KCNS2Q9ULS6 477 aa14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 NOSIPQ9Y314 301 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-215ENST00000597649 MGAM2Q2M2H8 2515 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 IGHV4-61A0A0C4DH41 118 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 SERINC4A6NH21 518 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 PDLIM1O00151 329 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 FCMRO60667 390 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 UBOX5O94941 541 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 SLC6A2P23975 617 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 APOBEC3AP31941 199 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 NR4A2P43354 598 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 MERTKQ12866 999 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 SYPL1Q16563 259 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 SWI5Q1ZZU3 235 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 CCDC103Q8IW40 242 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 DEPDC4Q8N2C3 294 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 ANKFN1Q8N957 763 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 OR10A6Q8NH74 314 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 C1orf159Q96HA4 380 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 FOXN4Q96NZ1 517 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 TRNT1Q96Q11 434 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 SOX7Q9BT81 388 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 IKZF5Q9H5V7 419 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 KAT8Q9H7Z6 458 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 CACYBPQ9HB71 228 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 POLE3Q9NRF9 147 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 TAS2R16Q9NYV7 291 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 WDR45Q9Y484 360 aa14.39□□□□□ -0.11
SHKBP1-215ENST00000597649 BCAS1O75363 584 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 CYP7B1O75881 506 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 BCHEP06276 602 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 CSF3P09919 207 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 NUDT7P0C024 238 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 BMP2P12643 396 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 CRISP3P54108 245 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 GPR68Q15743 365 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 SYT14P1Q58G82 188 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 C9orf135Q5VTT2 229 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 LRRC74BQ6ZQY2 392 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 SERPINA11Q86U17 422 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 ST8SIA1Q92185 356 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 ARL5BQ96KC2 179 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 SORCS2Q96PQ0 1159 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 SPATA9Q9BWV2 254 aa14.38□□□□□ -0.11
SHKBP1-215ENST00000597649 PIF1Q9H611 641 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms