RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 ZNF300Q96RE9 604 aaPredicted RBP10.53□□□□□ -0.72
VPS52-213ENST00000461743 WFDC6Q9BQY6 131 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 C12orf49Q9H741 205 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 MCCC2Q9HCC0 563 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 PARPBPQ9NWS1 579 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 ADA2Q9NZK5 511 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 CRIM1Q9NZV1 1036 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 MAGEL2Q9UJ55 1249 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 B3GALT5Q9Y2C3 310 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 NOSIPQ9Y314 301 aaKnown RBP10.53□□□□□ -0.72
VPS52-213ENST00000461743 SH3GLB1Q9Y371 365 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 FLVCR1Q9Y5Y0 555 aa10.53□□□□□ -0.72
VPS52-213ENST00000461743 RAI1Q7Z5J4 1906 aaPredicted RBP10.52□□□□□ -0.72
VPS52-213ENST00000461743 SH3D21A4FU49 640 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 HTR3EA5X5Y0 456 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 OR6C65A6NJZ3 312 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 AKAP8O43823 692 aaKnown RBP10.52□□□□□ -0.73
VPS52-213ENST00000461743 AKR7A3O95154 331 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 IFNW1P05000 195 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 KLK2P20151 261 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 COX5AP20674 150 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 PAX7P23759 505 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 RPS5P46782 204 aaKnown RBP10.52□□□□□ -0.73
VPS52-213ENST00000461743 TAS2R41P59536 307 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 MXRA7P84157 204 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 TLE4Q04727 773 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 DAZAP2Q15038 168 aaPredicted RBP10.52□□□□□ -0.73
VPS52-213ENST00000461743 IFI44LQ53G44 452 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 TTC33Q6PID6 262 aaPredicted RBP10.52□□□□□ -0.73
VPS52-213ENST00000461743 NUFIP2Q7Z417 695 aaKnown RBP10.52□□□□□ -0.73
VPS52-213ENST00000461743 OFCC1Q8IZS5 231 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 TMEM99Q8N816 258 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 STEAP2Q8NFT2 490 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 OR9K2Q8NGE7 335 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 FAM162AQ96A26 154 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 APH1AQ96BI3 265 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 KTI12Q96EK9 354 aaPredicted RBP10.52□□□□□ -0.73
VPS52-213ENST00000461743 SLC41A3Q96GZ6 507 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 TPD52L3Q96J77 140 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 HDHD5Q9BXW7 423 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 MUC13Q9H3R2 512 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 GORASP2Q9H8Y8 452 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 ZNF226Q9NYT6 803 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 MALT1Q9UDY8 824 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 SLC7A7Q9UM01 511 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 SAMD4AQ9UPU9 718 aaKnown RBP10.52□□□□□ -0.73
VPS52-213ENST00000461743 GPR52Q9Y2T5 361 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 PRR14LQ5THK1 2151 aa10.52□□□□□ -0.73
VPS52-213ENST00000461743 POLQO75417 2590 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 PDZD2O15018 2839 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 CSMD1Q96PZ7 3565 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 LOC102725191A0A1B0GVB3 256 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 FAM221AA4D161 298 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 A6NNC1 897 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 ZNF814B7Z6K7 855 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 MRPL33O75394 65 aaKnown RBP10.51□□□□□ -0.73
VPS52-213ENST00000461743 LYPD3O95274 346 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 ZNF682O95780 498 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 SERPINA1P01009 418 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 BGLAPP02818 100 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 FAM27E3Q08E93 113 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 MTX3Q5HYI7 312 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 C1QTNF12Q5T7M4 302 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 STAC2Q6ZMT1 411 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 DEF8Q6ZN54 512 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 RBM45Q8IUH3 476 aaKnown RBP10.51□□□□□ -0.73
VPS52-213ENST00000461743 CCDC103Q8IW40 242 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 ZNF100Q8IYN0 542 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 DEFB107AQ8IZN7 70 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 RNF217Q8TC41 542 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 TAAR8Q969N4 342 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 NSL1Q96IY1 281 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 HSH2DQ96JZ2 352 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 PRR14Q9BWN1 585 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 ASPNQ9BXN1 380 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 KLHL4Q9C0H6 718 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 C1orf21Q9H246 121 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 FKRPQ9H9S5 495 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 MRPL39Q9NYK5 338 aaKnown RBP10.51□□□□□ -0.73
VPS52-213ENST00000461743 C6orf203Q9P0P8 240 aaPredicted RBP10.51□□□□□ -0.73
VPS52-213ENST00000461743 CD300AQ9UGN4 299 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 RCE1Q9Y256 329 aa10.51□□□□□ -0.73
VPS52-213ENST00000461743 SPG11Q96JI7 2443 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 CSMD2Q7Z408 3487 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 M0R082 166 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 RAMP1O60894 148 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 THY1P04216 161 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 PRF1P14222 555 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 CRYGSP22914 178 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 GRPRP30550 384 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 SLC25A3Q00325 362 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 ST3GAL3Q11203 375 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 ITGADQ13349 1161 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 EXOC3L2Q2M3D2 409 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 SFRP5Q5T4F7 317 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 FBXW9Q5XUX1 488 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 TMEM225Q6GV28 225 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 GLYATQ6IB77 296 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 CASP12Q6UXS9 341 aa10.5□□□□□ -0.73
VPS52-213ENST00000461743 H1FNTQ75WM6 255 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms