RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr1136Q0VBI4 310 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tas2r40Q7TQB8 319 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rab9bQ8BHH2 201 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rpp25Q91WE3 199 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 C1qtnf2Q9D8U4 294 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gpr88Q9EPB7 384 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Vmn1r90A0A087WR36 309 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 4930433I11RikA0A0U1RPT6 723 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1432A0A140LHS7 346 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 A0A1L1SV24 88 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zfp442A2AQA0 667 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fbxw24E9PXM9 466 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 PtprhE9Q0N2 971 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tmem44E9Q4M0 433 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fcn1O70165 334 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 SgceO70258 437 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 FhitO89106 150 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 P01664 111 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Pou3f4P62515 361 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc10a2P70172 348 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zfp763Q8BIC7 588 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Sertm1Q8CD78 107 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Csnka2ipQ8CH19 720 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Pttg1ipQ8R143 174 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr134Q8VG95 312 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Bex4Q9CWT2 118 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Prss52Q9D9M0 321 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr287E9PZS7 322 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Kcnmb3E9Q7U0 239 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1360K9J6X0 313 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 IlkO55222 452 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tcn2O88968 430 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cyp1a2P00186 513 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Klk1b16P04071 261 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cdk10Q3UMM4 360 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Itgb2lQ3UV74 738 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Hsf5Q5ND04 624 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Galk2Q68FH4 458 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1359Q7TQU5 313 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 NarsQ8BP47 559 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Sf3b4Q8QZY9 424 aaKnown RBP14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Defb35Q8R2I3 63 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Klhdc8bQ9D2D9 354 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Cts6Q9ET52 334 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 ClnkQ9QZE2 435 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm17728E9Q5K2 132 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 StsP50427 624 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 CluQ06890 448 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gcnt7Q3V3K7 433 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Taf6Q62311 678 aaKnown RBP14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tas2r143Q7TQB9 293 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1133Q7TR44 313 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Adgrd1Q80T32 903 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Plekho2Q8K124 495 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Wasf3Q8VHI6 501 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Spns3Q9D232 514 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc23a2Q9EPR4 648 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Mageh1Q9NWG9 218 aa14.49□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 1700017D01RikG5E851 209 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gpr50O88495 591 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fgf3P05524 245 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 LcatP16301 438 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc30a2Q2HJ10 371 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Klhl21Q3U410 597 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 CstbQ62426 98 aaKnown RBP14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr835Q7TRG7 311 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ppp1r3eQ8BRJ4 279 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Nop16Q9CPT5 178 aaKnown RBP14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fbxo6Q9QZN4 295 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm13420A0A140LJJ2 248 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 5830473C10RikF8VQ07 620 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Aqp2P56402 271 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 EgflamQ4VBE4 1017 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gfm1Q8K0D5 751 aaKnown RBP14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Tor2aQ8R1J9 321 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Q8R3Y5 413 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Clec2fQ8VI21 196 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Slc41a3Q921R8 488 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zgrf1Q0VGT4 1863 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr576A0A0G2JFH3 312 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Vsig10l2A0A140LHF2 776 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Zfp712E9PXJ4 705 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1425K7N659 312 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Ypel5P62700 121 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Fndc9Q8BJN4 226 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Vmn1r192Q8K4C9 300 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1426Q8VG74 311 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Mettl18Q9CZ09 362 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Wdr89Q9D0R9 386 aa14.48□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1493-ps1A0A140LHU2 316 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 A0A286YDP4 300 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Vmn2r91E9Q2U5 856 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Gm11168J3QN50 228 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Atp1b1P14094 304 aaKnown RBP14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Oprd1P32300 372 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Nanos3P60324 178 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Rnf223Q3UV31 285 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 PfplQ5RKV8 702 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 NagsQ8R4H7 527 aa14.47□□□□□ -0.09
Ccdc88b-201ENSMUST00000113440 Olfr1280Q8VGG8 305 aa14.47□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms