RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ZNF836Q6ZNA1 936 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 LRRC74BQ6ZQY2 392 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 TUBA1AQ71U36 451 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 SLC46A3Q7Z3Q1 461 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 PEX5LQ8IYB4 626 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 C1orf162Q8NEQ5 155 aaPredicted RBP11.99□□□□□ -0.49
HDAC5-208ENST00000588419 OR9K2Q8NGE7 335 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 C10orf105Q8TEF2 133 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 NANOS1Q8WY41 292 aaKnown RBP11.99□□□□□ -0.49
HDAC5-208ENST00000588419 AURKBQ96GD4 344 aaPredicted RBP11.99□□□□□ -0.49
HDAC5-208ENST00000588419 VRK1Q99986 396 aaPredicted RBP11.99□□□□□ -0.49
HDAC5-208ENST00000588419 SHARPINQ9H0F6 387 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 MEAF6Q9HAF1 191 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 AIG1Q9NVV5 245 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 P2RX2Q9UBL9 471 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 COL6A5A8TX70 2615 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 ELOA3DA6NLF2 546 aaPredicted RBP11.98□□□□□ -0.49
HDAC5-208ENST00000588419 PDLIM1O00151 329 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 TM9SF1O15321 606 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 LGI1O95970 557 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 PGRP06401 933 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 CSF3P09919 207 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 RPS4Y1P22090 263 aaKnown RBP11.98□□□□□ -0.49
HDAC5-208ENST00000588419 USF1P22415 310 aaPredicted RBP11.98□□□□□ -0.49
HDAC5-208ENST00000588419 IL12AP29459 219 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 CRATP43155 626 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 PDLIM4P50479 330 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 UBE2NP61088 152 aaKnown RBP11.98□□□□□ -0.49
HDAC5-208ENST00000588419 COPZ1P61923 177 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 SNRPD2P62316 118 aaKnown RBP11.98□□□□□ -0.49
HDAC5-208ENST00000588419 H3F3AP84243 136 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 SRSF2Q01130 221 aaKnown RBP11.98□□□□□ -0.49
HDAC5-208ENST00000588419 ELOA3BQ3SY89 546 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 LIN52Q52LA3 116 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 ATG16L1Q676U5 607 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 TMEM225Q6GV28 225 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 NIPAL3Q6P499 406 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 SPATA19Q7Z5L4 167 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 ABHD12BQ7Z5M8 362 aaPredicted RBP11.98□□□□□ -0.49
HDAC5-208ENST00000588419 ARIH2OSQ8N7S6 290 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 ANKS4BQ8N8V4 417 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 ELOA3Q8NG57 546 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 SORCS2Q96PQ0 1159 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 AMBRA1Q9C0C7 1298 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 CACYBPQ9HB71 228 aaKnown RBP11.98□□□□□ -0.49
HDAC5-208ENST00000588419 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.98□□□□□ -0.49
HDAC5-208ENST00000588419 FBN3Q75N90 2809 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 ATRQ13535 2644 aa11.98□□□□□ -0.49
HDAC5-208ENST00000588419 A0A096LPE4 126 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 IGHV1-18A0A0C4DH31 117 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 A0A1W2PPZ6 126 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 LIPT2A6NK58 231 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 AQP7P3A6NL99 342 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 ZNF587BE7ETH6 402 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 SDHDO14521 159 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 RFXANKO14593 260 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 FRS3O43559 492 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 KRT75O95678 551 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 ETFAP13804 333 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 GTF2E2P29084 291 aaKnown RBP11.97□□□□□ -0.49
HDAC5-208ENST00000588419 EPHA3P29320 983 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 SELENOPP49908 381 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 LSM11P83369 360 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDAC5-208ENST00000588419 BST1Q10588 318 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 IQCCQ4KMZ1 466 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 CEP85LQ5SZL2 805 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 HHATQ5VTY9 493 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 PRAMEF8Q5VWM4 474 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 PRAMEF7Q5VXH5 474 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 ZNF440Q8IYI8 595 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 LRRC34Q8IZ02 419 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 KIRREL3Q8IZU9 778 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 POMGNT2Q8NAT1 580 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 OR52P1PQ8NH57 321 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 MGARPQ8TDB4 240 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 TMEM45BQ96B21 275 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 WDR55Q9H6Y2 383 aaPredicted RBP11.97□□□□□ -0.49
HDAC5-208ENST00000588419 MTHFD2LQ9H903 347 aaPredicted RBP11.97□□□□□ -0.49
HDAC5-208ENST00000588419 KCNS2Q9ULS6 477 aa11.97□□□□□ -0.49
HDAC5-208ENST00000588419 ZNF443Q9Y2A4 671 aaPredicted RBP11.97□□□□□ -0.49
HDAC5-208ENST00000588419 NR5A2O00482 541 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 LMX1BO60663 402 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 SNUPNO95149 360 aaKnown RBP11.96□□□□□ -0.49
HDAC5-208ENST00000588419 APEHP13798 732 aaKnown RBP11.96□□□□□ -0.49
HDAC5-208ENST00000588419 DSTNP60981 165 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 IL1RL1Q01638 556 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 TBRG1Q3YBR2 411 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 WBP2NLQ6ICG8 309 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 OGFOD2Q6N063 350 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 OR1K1Q8NGR3 316 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 PROX1Q92786 737 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 SLC25A36Q96CQ1 311 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 SLC38A2Q96QD8 506 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 TMEM109Q9BVC6 243 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 SLC6A13Q9NSD5 602 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 TMEM45AQ9NWC5 275 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 LPAR3Q9UBY5 353 aa11.96□□□□□ -0.49
HDAC5-208ENST00000588419 LOC100289279A0A1B0GTE1 492 aa11.95□□□□□ -0.5
HDAC5-208ENST00000588419 CDHR4A6H8M9 788 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms